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jorainer / ensembldb

This is the ensembldb development repository.
https://jorainer.github.io/ensembldb
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genomeToProtein's output contains metadata with two identical tx_id columns #136

Closed kotliary closed 2 years ago

kotliary commented 2 years ago

I believe this is due to using cbind. 

mcols(prts) <- cbind(mcols(prts)[, c("tx_id", "cds_ok")], mcols(txs))

Probably "tx_id" can be removed here.

jorainer commented 2 years ago

Good catch! I've fixed it in the release branch (Bioconductor 3.15) and the developmental version. Changes should get propagated in the next couple of days and the package can then be updated with BiocManager::install().

Closing the issue now. Feel free to re-open if needed.