This repository contains materials employed in our work to segment subcortical brain structures by employing a 3D fully Convolutional Neural Network:: 3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study Accepted in Neuroimage, April,17th 2017.
If either segmentation labels or probability maps generated in this large-scale study are used, please cite this work(Exactly citation coming soon):
[1] Jose Dolz, Christian Desrosiers and Ismail Ben Ayed "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study". NeuroImage. In press.
The code employed to generate these results has been released here
For any enquiry or further questions you can reach me at: jose.dolz.upv@gmail.com