issues
search
josuebarrera
/
GenEra
genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.
GNU General Public License v3.0
45
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Bug-fix for ';' seperated tax-ids gereated by diamond when using the NR database.
#22
Eulium
closed
7 months ago
1
JGI like ID symbols fix
#21
RocesV
closed
9 months ago
1
-a option : can we concatenate custom output with precomputed blast against nr ?
#20
Proginski
opened
10 months ago
2
split results
#19
Proginski
opened
10 months ago
7
v1.4.0 : no tmp .bout files
#18
Proginski
opened
10 months ago
3
genEra update -F help description
#17
RocesV
closed
10 months ago
0
Fast Step 3 Implementation
#16
RocesV
closed
10 months ago
3
Docker image with version tag
#15
gallardoalba
closed
10 months ago
2
HPC tunning
#14
Proginski
closed
10 months ago
7
Problem with setting up Diamond databases
#13
CWYuan08
closed
10 months ago
12
Issues templates
#12
LotharukpongJS
closed
1 year ago
0
Updating the README.md
#11
LotharukpongJS
closed
1 year ago
0
Add paper link in README.md
#10
LotharukpongJS
closed
1 year ago
0
NA for all gene ages
#9
glarue
closed
1 year ago
4
`ncbitax2lin` memory fix
#8
glarue
closed
1 year ago
2
GenEra run fails at Step 2 - Rearranged ncbi_lineages file not found
#7
gauravdiwan89
closed
1 year ago
3
DIAMOND search step segfault
#6
glarue
closed
1 year ago
6
Comparison of protein families from multiple species
#5
JSSaini
closed
1 year ago
2
Maybe Ensembl protein formart bugs
#4
yxj17173
closed
1 year ago
2
Trouble with step2
#3
yxj17173
closed
1 year ago
8
May I use GenEra to study the genomic phylostratigraphy of Mycobacterium tuberculosis?
#2
TaoCheng98
closed
2 years ago
1
Trouble with installation
#1
billadelonge
closed
2 years ago
6