#346 zoo_to_otx working

Reviewer's Guide by Sourcery

This PR implements changes to support OTX (One True X) key functionality in the brick reference system. The main changes include modifying the BrickRef class to store attributes with OTX key flags and updating the grouping logic to handle these flags appropriately.

Sequence diagram for setting attributes with OTX keys

sequenceDiagram
    participant Test as Test Suite
    participant BrickRef
    Test->>BrickRef: set_attribute(x_attribute, True)
    BrickRef->>BrickRef: _attributes[x_attribute] = {"otx_key": True}
    Test->>BrickRef: set_attribute(x_attribute, False)
    BrickRef->>BrickRef: _attributes[x_attribute] = {"otx_key": False}

Updated class diagram for BrickRef

classDiagram
    class BrickRef {
        - str brick_name
        - str categorys
        - dict<str, dict<str, bool>> _attributes
        + set_attribute(x_attribute: str, otx_key: bool)
        + list<str> get_headers_list()
        + list<str> get_otx_keys_list()
        + list<str> get_otx_values_list()
    }
    note for BrickRef "Attributes now store OTX key flags"

File-Level Changes

Change	Details	Files
Modified BrickRef class to support OTX key functionality	Changed _attributes from set[str] to dict[str, dict[str, bool]] to store OTX key flags Updated set_attribute method to accept otx_key boolean parameter Added get_otx_keys_list method to return attributes marked as OTX keys Added get_otx_values_list method to return attributes not marked as OTX keys	`src/f09_brick/brick.py` `src/f09_brick/test_brick_format/test_brick_column.py`
Refactored grouping functionality to use SQL for consistent value filtering	Renamed get_groupby_dataframe to get_grouping_with_all_values_equal_df Updated SQL query generation to handle OTX key-based grouping Renamed get_consistent_values_sql_query to get_grouping_with_all_values_equal_sql_query	`src/f09_brick/pandas_tool.py` `src/f00_instrument/db_toolbox.py` `src/f09_brick/test_brick_config/test_pandas_tool.py`
Updated brick reference handling and file operations	Renamed get_brickref to get_brickref_obj for clarity Renamed get_brickref_dict to get_brickref_from_file Added get_brick_format_filename helper function	`src/f09_brick/brick_config.py` `src/f09_brick/test_brick_config/test_brick_config_.py`
Modified zoo_to_otx transformation logic	Updated _group_by_brick_columns to use OTX keys for grouping Fixed column ordering in DataFrame operations Added tests for OTX transformation scenarios	`src/f10_world/world.py` `src/f10_world/test/test_world_jungle.py`

Possibly linked issues

#346: PR adds otx key handling in brick format, addressing the issue's requirements.

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jschalk / jaar