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jsxlei
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SCALEX
Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space
BSD 3-Clause "New" or "Revised" License
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Loss function of VAE
#27
blastlove
closed
9 months ago
1
Preprocessing of ATAC Data
#26
blastlove
closed
10 months ago
1
mouse_brain_atac datasets failed to download
#25
blastlove
closed
10 months ago
1
Possible bug in preprocessing
#24
Beiusxzw
closed
11 months ago
0
datasets failed to download
#23
UnkownNames
opened
1 year ago
6
np.warnings has been removed from newer version of numpy
#21
zhaleh-safikhani
closed
1 year ago
1
Customize num_workers
#20
marx-alex
closed
1 year ago
1
fix: stop SingleCellDataset.__getitem_() from trying to use "toarray"…
#19
milescsmith
closed
1 year ago
0
model.train() setting
#18
GlancerZ
closed
1 year ago
1
can not repeat your tutorial "ntegrating scATAC-seq data using SCALEX"
#17
daweibushen
closed
1 year ago
3
SCALEX metrics help
#16
kostaslazaros
closed
1 year ago
8
Projection onto new dataset requires shared latent space
#15
ryeking2010
closed
1 year ago
1
Paths are incorrectly handled
#14
scottgigante-immunai
closed
1 year ago
1
Uncorrect representation assignment?
#13
biosyssun
closed
1 year ago
2
Without X_umap in obsm of output adata
#12
houruiyan
closed
1 year ago
4
TypeError: SCALEX() got an unexpected keyword argument 'test_list
#11
houruiyan
closed
1 year ago
3
Unused attribute n_domain in VAE
#10
parashardhapola
closed
1 year ago
2
indices in VAE.encodeBatch
#9
parashardhapola
closed
1 year ago
2
`outdir=None` throws errors
#8
scottgigante-immunai
closed
1 year ago
1
impute=True error
#7
scottgigante-immunai
closed
1 year ago
2
Intra-sample batches for large datasets
#6
parashardhapola
closed
1 year ago
1
fixed duplicated hanlders
#5
AaronNing
closed
1 year ago
0
CITE-seq
#3
ebrombacher
closed
1 year ago
4
Code to reproduce results?
#2
adamgayoso
closed
1 year ago
0