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julie-forman-kay-lab
/
IDPConformerGenerator
Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space
https://idpconformergenerator.readthedocs.io/
Apache License 2.0
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Problems packing sidechains with MCSCE
#282
erik-s99
opened
1 week ago
7
Problems with analysis Tools
#281
leonmti
closed
1 week ago
3
Add `Dockerfile` and docker installation and execution
#280
joaomcteixeira
opened
1 month ago
0
Add thirdparty software a git modules
#279
joaomcteixeira
opened
1 month ago
0
Consider adding `-edss50 5 3 2` as default
#278
joaomcteixeira
opened
2 months ago
1
Update installation instructions - only miniconda
#277
joaomcteixeira
closed
1 month ago
3
Add first steps to documentation
#276
joaomcteixeira
closed
1 month ago
2
Install fails due to `idpccp` on Windows
#275
erik-s99
opened
2 months ago
2
Error when calculating torsion angles
#274
vafol
closed
2 months ago
0
Fix Inter-Chain Clash Check
#273
menoliu
closed
3 months ago
0
Integrate multi-chain clash-checking into `ldrs`
#272
menoliu
closed
3 months ago
0
Added feature to skip chains while modelling multi-chain complexes in `ldrs`
#271
menoliu
closed
3 months ago
0
Suggestion: Ignore unmatched chains or chains (completely made up from) unknown residue identifiers for modeling
#270
benjbuch
opened
3 months ago
3
Chains that don't need to be modeled throw error in multi-chain complexes
#269
benjbuch
closed
3 months ago
4
Addendum note to users regarding `ldrs` prior to `v0.7.17`
#268
menoliu
closed
5 months ago
0
Fix `docs` workflow bug
#267
menoliu
closed
5 months ago
0
Fix edge case for chain detection in `ldrs`
#266
menoliu
closed
5 months ago
0
Fix issue with `ldrs` rotation matrix mirroring torsion angles
#265
menoliu
closed
5 months ago
0
Update citation for LDRS
#264
menoliu
closed
5 months ago
0
Bug-fix for `ldrs` file processing
#263
menoliu
closed
5 months ago
0
idpconfgen build stuck on macOS python 3.11.7
#262
benjbuch
closed
6 months ago
6
Update hyperlink in usage documentation for #260
#261
menoliu
closed
6 months ago
0
Update Documentation Clarity
#260
menoliu
closed
6 months ago
0
Update `sscalc` DSSP defaults and clarify documentation
#259
menoliu
closed
7 months ago
0
Update integration webhook secret - ReadTheDocs
#258
joaomcteixeira
closed
6 months ago
2
Update citing information
#257
joaomcteixeira
closed
8 months ago
0
Corrects reading CIF files without `#` end block
#256
joaomcteixeira
closed
8 months ago
0
Error reading CIF files without terminal `#` after coordinate block
#255
joaomcteixeira
closed
8 months ago
0
Update `libstructure.Structure` class documentation.
#254
joaomcteixeira
closed
8 months ago
0
Fix input sequence processing for single chains in `ldrs`
#253
menoliu
closed
9 months ago
0
Fix MC-SCE integration after PTM feature addition
#252
menoliu
closed
9 months ago
0
Update installation and usage documentation
#251
menoliu
closed
9 months ago
0
New 5 chars PDB IDs
#250
joaomcteixeira
opened
9 months ago
5
`contacts` module for creation of extended IDPCG database
#249
menoliu
closed
1 week ago
1
Update ReadTheDocs config file to v2
#248
joaomcteixeira
closed
9 months ago
0
RTD config file update
#247
joaomcteixeira
closed
9 months ago
1
Fix unit test error that arose from #245
#246
menoliu
closed
9 months ago
0
``--long`` method of building single chain IDPs
#245
menoliu
closed
9 months ago
0
Add more VDW radii and efficiency improvements
#244
menoliu
closed
9 months ago
1
Fix docs formatting for ldrs example
#243
menoliu
closed
11 months ago
0
Update documentation and remove Mac OS X `tests`
#242
menoliu
closed
11 months ago
1
Using Alpha Fold structures to construct the torsion database
#241
joaomcteixeira
opened
1 year ago
2
Fixes #239
#240
menoliu
closed
1 year ago
0
Recent installation issue
#239
menoliu
closed
1 year ago
1
Generating Conformers of Folded Proteins
#238
RC-2000
opened
1 year ago
2
PyPI and Anaconda
#237
joaomcteixeira
opened
1 year ago
0
`contacts` module for building complexes of disordered proteins
#236
menoliu
closed
1 year ago
6
Improve tracking statistics
#235
menoliu
opened
1 year ago
1
`HIP` instead of `HIS`
#234
joaomcteixeira
opened
1 year ago
1
Ignore certain PDBs during the building process
#233
joaomcteixeira
opened
1 year ago
4
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