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junjunlab / GseaVis

An implement R package to visualize GSEA results
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GseaVis

The goal of GseaVis is to visualize GSEA enrichment results as an implement package for enrichplot gseaplot2 function. And some codes origin from enrichplot package, thanks for Guangchuang Yu professor's contribution! The enrichment results from clusterProfiler and GSEA software can be supported as input for GseaVis for visualization.

You can mark your gene name on GSEA plot and this package also support more avaliable parameters to customize your own plot.

Installation

You can install the development version of GseaVis from GitHub with:

# install.packages("devtools")
devtools::install_github("junjunlab/GseaVis")

Citation

Jun Zhang (2022). GseaVis: An Implement R Package to Visualize GSEA Results. https://github.com/junjunlab/GseaVis.

Examples

image

Documentation

https://junjunlab.github.io/gseavis-manual/

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