How to do the mobiome mapping with bwa instead of MOSAIK?

jyhehir / mobster

For more details about Mobster please see

https://jyhehir.github.io/mobster/index.html

GNU General Public License v3.0

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How to do the mobiome mapping with bwa instead of MOSAIK? #10

Open guorongxu opened 6 years ago

guorongxu commented 6 years ago

Hi Jayne,

I am wondering how to replace MOSAIK with bwa to do the mobiome mapping in Mobster.properties. Could you provide an example Mobster.properties file for me?

Thanks, Guorong