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jyhehir / mobster

For more details about Mobster please see
https://jyhehir.github.io/mobster/index.html
GNU General Public License v3.0
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Exception in thread "main" java.lang.IllegalStateException: Iteration in progress #39

Open sph17 opened 4 years ago

sph17 commented 4 years ago

While running mobster, I get the following exception,

Exception in thread "main" java.lang.IllegalStateException: Iteration in progress at net.sf.samtools.BAMFileReader.query(BAMFileReader.java:347) at net.sf.samtools.SAMFileReader.query(SAMFileReader.java:363) at org.umcn.me.pairedend.AnchorClusterer.clusterClippedReads(Unknown Source) at org.umcn.me.pairedend.AnchorClusterer.clusterSplitAnchorsToBAM(Unknown Source) at org.umcn.me.pairedend.AnchorClusterer.runFromPropertiesFile(Unknown Source) at org.umcn.me.pairedend.Mobster.main(Unknown Source)

I was wondering has anyone else encountered this/what is the error here