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jyhehir / mobster

For more details about Mobster please see
https://jyhehir.github.io/mobster/index.html
GNU General Public License v3.0
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Test Run Error #40

Closed sph17 closed 3 years ago

sph17 commented 4 years ago

I'm trying to run the test file with Mobster but am getting the following error. I don't see any TestSample files listed in the directory

`java -Xmx8G -jar ./target/MobileInsertions-0.2.4.1.jar \
    -properties ./target/Mobster.properties \
    -out TestSample

0 [main] ERROR Mobster  - TestSample_insertstats (No such file or directory)`
jyhehir commented 4 years ago

do you have  test_data/chr12_wgs_3000ins_100excl_10x_bwadef.bam

this file is quite large and requires  git lfs for cloning

On Monday, 22 June 2020, 08:37:39 pm GMT+2, Stephanie Hao notifications@github.com wrote:

I'm trying to run the test file with Mobster but am getting the following error. I don't see any TestSample files listed in the directory

java -Xmx8G -jar ./target/MobileInsertions-0.2.4.1.jar \ -properties ./target/Mobster.properties \ -out TestSample 0 [main] ERROR Mobster - TestSample_insertstats (No such file or directory)

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