karmel homer-idr issues - Githubissues

karmel / homer-idr

Applying IDR analysis to Homer peaks.

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utils.py:139: RuntimeWarning: divide by zero encountered in log10 pvals = -np.log10(pval_col)

#8 meyana301 opened 3 years ago
2
Fix a couple of things

#7 ycl6 opened 4 years ago
1
Math domain error at final output

#6 burdoj opened 8 years ago
0
Problem when running run_idr.py idr in the final steps "Error in readChar(con, 5L, useBytes = TRUE) : cannot open the connection"

#5 jonasungerback closed 8 years ago
2
Not generating pseudo replicates for tag replicates

#4 praneet007 opened 8 years ago
25
How to use homer-idr to identify super enhancer with 3 ChIP-seq of H3K27ac replicates?

#3 xflicsu opened 9 years ago
1
bug in: 8. Call peaks on each of the pooled pseudoreplicate tag directories.

#2 xflicsu closed 8 years ago
3
not require cwd

#1 glennsb opened 10 years ago
2