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kbaseapps
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kb_gtdbtk
GTDB-Tk App
MIT License
4
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stupid vscode lookup lied to me
#42
MrCreosote
closed
4 years ago
2
ugh, fix mkdir() again
#41
MrCreosote
closed
4 years ago
2
bugfix mkdir
#40
MrCreosote
closed
4 years ago
2
Use rewritten code in impl
#39
MrCreosote
closed
4 years ago
1
Add report generation function
#38
MrCreosote
closed
4 years ago
1
Generate safe IDs in runner, not downloader
#37
MrCreosote
closed
4 years ago
1
Add tests for GTDB-tk runner
#36
MrCreosote
closed
4 years ago
1
Allow min_perc_aa to be a float
#35
MrCreosote
closed
4 years ago
1
Add unit tests for sequence downloader module
#34
MrCreosote
closed
4 years ago
1
Remove VScode config
#33
MrCreosote
closed
4 years ago
1
Make tests run in travis part one of many
#32
MrCreosote
closed
4 years ago
0
update gtdbtk to v1.0.2
#31
psdehal
closed
4 years ago
0
Reduce report size drastically
#30
MrCreosote
closed
4 years ago
0
remove TODO
#29
MrCreosote
closed
4 years ago
0
Fix binned contig handling
#28
MrCreosote
closed
4 years ago
1
whoops
#27
MrCreosote
closed
4 years ago
0
Fix single genome upa processing
#26
MrCreosote
closed
4 years ago
0
fix assembly set processing
#25
MrCreosote
closed
4 years ago
0
remove debugging stuff
#24
MrCreosote
closed
4 years ago
0
Fix filename issues in gtdb-tk
#23
MrCreosote
closed
4 years ago
0
Don't process filtered file
#22
MrCreosote
closed
4 years ago
0
gtdb-tk key names are not consistent
#21
MrCreosote
closed
4 years ago
0
Attempt 1 at debugging missing output
#20
MrCreosote
closed
4 years ago
1
doh
#19
MrCreosote
closed
4 years ago
0
Make upa file name safe
#18
MrCreosote
closed
4 years ago
0
Attempt 1 at remapping data IDs in gtdbtk output
#17
MrCreosote
closed
4 years ago
1
print out results of gtdb-tk
#16
MrCreosote
closed
4 years ago
0
Fix mapping bugs
#15
MrCreosote
closed
4 years ago
0
bad object info index for version
#14
MrCreosote
closed
4 years ago
0
Fix copy of a copy issues
#13
MrCreosote
closed
4 years ago
0
Open tempfile in non-binary mode
#12
MrCreosote
closed
4 years ago
0
and again
#11
MrCreosote
closed
4 years ago
0
os.join -> os.path.join
#10
MrCreosote
closed
4 years ago
0
whoops
#9
MrCreosote
closed
4 years ago
0
fix dangling parens
#8
MrCreosote
closed
4 years ago
0
Merge in the genomeset filename fixes w/ build fixes
#7
MrCreosote
closed
4 years ago
0
Add name to kbase.yaml
#6
MrCreosote
closed
4 years ago
0
Fix build attempt 1
#5
MrCreosote
closed
4 years ago
0
Fix binned contigs filenames
#4
MrCreosote
closed
4 years ago
0
Fix copy of a copy issues
#3
MrCreosote
closed
4 years ago
0
Use safe filenames for GTDB-Tk input
#2
MrCreosote
closed
4 years ago
1
bump version to 0.3.2
#1
jungbluth
closed
5 years ago
0
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