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kbaseattic
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KBaseFBAModeling
Flux balance modeling service. Deploys both the client and service codes.
MIT License
6
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11
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Error: JSONRPCError: No equal sign in [reaction]!
#59
Ghabry
opened
7 years ago
1
Removed http substitution in WS URL
#58
msneddon
closed
6 years ago
3
Merge staging to master
#57
kkellerlbl
closed
8 years ago
0
Merge from dev to staging
#56
scanon
closed
8 years ago
0
Update workspace used to store MetabolicMaps
#55
samseaver
opened
8 years ago
0
Adding list to SubsystemAnnotation spec
#54
samseaver
closed
9 years ago
0
Adding list to SubsystemAnnotation spec
#53
samseaver
closed
9 years ago
0
Updated specs to include subsystem annotation
#52
samseaver
closed
9 years ago
0
Enabling search for compartments that are not in biochemistry
#51
samseaver
closed
7 years ago
1
Staging
#50
cshenry
closed
9 years ago
0
Conserving hb status
#49
samseaver
closed
6 years ago
1
Reaction balancing
#48
samseaver
closed
6 years ago
1
Fix of missing boundary exchange in printed SBML file
#47
samseaver
closed
9 years ago
0
Merge from Staging
#46
scanon
closed
9 years ago
0
small hack to fix copy of genome features
#45
samseaver
closed
9 years ago
2
Update Makefile
#44
scanon
closed
9 years ago
0
Dev
#43
scanon
closed
9 years ago
0
Update Makefile
#42
scanon
closed
9 years ago
1
Removing undesired reactions from list of guaranteed reactions
#41
samseaver
closed
9 years ago
0
Fixing possible bug in finding job id
#40
samseaver
closed
9 years ago
1
Job path bug
#39
samseaver
closed
9 years ago
1
Equation sorting
#38
samseaver
closed
9 years ago
0
use FBA Object id specified by user (or generated by runfba) rather t…
#37
mdejongh
closed
9 years ago
3
Fixes for Biochemistry
#36
samseaver
closed
9 years ago
0
changes to support the new Transcriptome method, continuous objective function
#35
mdejongh
closed
9 years ago
0
Adding drain flux for compound cpd02701, needed for biotin biosynthesis
#34
samseaver
closed
9 years ago
0
adjust_model_reaction response
#33
nconrad
opened
9 years ago
0
return object refs in get_template_model(), skip templateReactions in ob...
#32
mmundy42
closed
9 years ago
1
fix checking for transport reaction
#31
mmundy42
closed
9 years ago
0
fix setting template on fba-importfbamodel command
#30
mmundy42
closed
9 years ago
0
max/min flux in result
#29
nconrad
closed
7 years ago
1
ModelReaction should use its own isTransporter method, because it doesn'...
#28
mdejongh
closed
9 years ago
0
Update test_pipeline.t
#27
levinas
closed
9 years ago
0
Minor adjustments to use of viridiplantae to recognize plant genomes
#26
samseaver
closed
9 years ago
1
Updating detection of viridiplantae in taxonomy and Golgi in compartment detection
#25
samseaver
closed
9 years ago
1
Fix gapfill cmds
#24
mmundy42
closed
9 years ago
0
Master
#23
samseaver
closed
9 years ago
0
Deploy
#22
samseaver
closed
9 years ago
0
string comparison in build_sequence_object
#21
levinas
opened
9 years ago
2
Fix save notes in metadata
#20
mmundy42
closed
9 years ago
1
Fix set genome outputid
#19
mmundy42
closed
9 years ago
0
Adding metabolomics file
#18
samseaver
closed
10 years ago
0
Adding boundary compound for SBML file generation, which otherwise block...
#17
samseaver
closed
10 years ago
0
update fba-url to check server version
#16
mmundy42
closed
10 years ago
0
fix returning all items that match query in get_compounds(),get_reactions()
#15
mmundy42
closed
10 years ago
1
change object type from RxnSensitivity to ReactionSensitivityAnalysis
#14
mmundy42
closed
10 years ago
0
Fix sbml model import
#13
mmundy42
closed
10 years ago
0
fix setting solver in fba-runfba command
#12
mmundy42
closed
10 years ago
0
Removing apostrophes and quotes from within node text
#11
samseaver
closed
10 years ago
0
Updating use of template reactions to account for possible duplicates
#10
samseaver
closed
10 years ago
0
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