search

kbenoit / LIWCalike

R package to extend quanteda to mimic LIWC
37 stars 6 forks source link

LIWCalike installation error #1

Closed anonym0305 closed 7 years ago

anonym0305 commented 7 years ago

I tried to install LIWCalike but ran into error. I tried to install MKL and RevoUtilsMath packages but couldn't locate/install them.

devtools::install_github("kbenoit/LIWCalike") Downloading GitHub repo kbenoit/LIWCalike@master from URL https://api.github.com/repos/kbenoit/LIWCalike/zipball/master Installing LIWCalike Installing 1 package: stringi Installing package into ‘C:/Users/Documents/R/win-library/3.3’ (as ‘lib’ is unspecified) trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/bin/windows/contrib/3.3/stringi_1.1.2.zip' Content type 'application/zip' length 14264581 bytes (13.6 MB) downloaded 13.6 MB

package ‘stringi’ successfully unpacked and MD5 sums checked Warning: cannot remove prior installation of package ‘stringi’

Error : .onLoad failed in loadNamespace() for 'RevoUtilsMath', details: call: NULL error: To use RevoUtilsMath you must first install the MKL Math Library. Visit http://mran.revolutionanalytics.com/download. If you have previously installed the MKL Math Library, remove it using Add/Remove Programs, then re-install. Error: package or namespace load failed for 'RevoUtilsMath' Execution halted Error: Command failed (1)

kbenoit commented 7 years ago

Should be fixed now, and working with the newest quanteda.

anonym0305 commented 7 years ago

This is what I'm seeing...

install.packages("quanteda") Installing package into ‘C:/Users/svaid/Documents/R/win-library/3.3’ (as ‘lib’ is unspecified)

There is a binary version available but the source version is later: binary source needs_compilation quanteda 0.9.8.3 0.9.8.5 TRUE

Binaries will be installed trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/bin/windows/contrib/3.3/quanteda_0.9.8.3.zip' Content type 'application/zip' length 4245276 bytes (4.0 MB) downloaded 4.0 MB

package ‘quanteda’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in C:\Users\s\AppData\Local\Temp\Rtmp4uviJh\downloaded_packages

devtools::install_github("kbenoit/LIWCalike") Error in curl::curl_fetch_disk(url, x$path, handle = handle) : Couldn't resolve host name

kbenoit commented 7 years ago

See the DESCRIPTION for dependencies. You will need to have R >= 3.2.2 and quanteda >= 0.9.9.

Suggest before you install LIWCalike, you first run

update.packages(ask = FALSE)
anonym0305 commented 7 years ago

I have R version 3.3.2, but am unable to install quanteda >=0.9.9. Every time I reinstall quanteda on R Studio I'm able to only install quanteda 9.8.3, as above.

kbenoit commented 7 years ago

sessionInfo()?

Sent from my iPhone

On 2 Mar 2017, at 17:29, anonymousBlueDevil notifications@github.com<mailto:notifications@github.com> wrote:

I have R version 3.3.2, but am unable to install quanteda >=0.9.9. Every time I reinstall quanteda on R Studio I'm able to only install quanteda 9.8.3, as above.

— You are receiving this because you modified the open/close state. Reply to this email directly, view it on GitHubhttps://github.com/kbenoit/LIWCalike/issues/1#issuecomment-283721133, or mute the threadhttps://github.com/notifications/unsubscribe-auth/ACFMZq1_85jjvNzmB31-PxXA2csOLULPks5rhvxbgaJpZM4MRIZS.

anonym0305 commented 7 years ago

sessionInfo() R version 3.3.2 (2016-10-31) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1

locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] devtools_1.12.0

loaded via a namespace (and not attached): Error in x[["Version"]] : subscript out of bounds In addition: Warning message: In FUN(X[[i]], ...) : DESCRIPTION file of package 'curl' is missing or broken

kbenoit commented 7 years ago

I have no idea why you are unable to install the newest quanteda version from CRAN. On my Windows 7 virtual machine, it installs just fine. Same OS and R version as yours.


R version 3.3.2 (2016-10-31) -- "Sincere Pumpkin Patch"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

[Workspace loaded from ~/.RData]

> sessionInfo()
R version 3.3.2 (2016-10-31)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 7 x64 (build 7601) Service Pack 1

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252    LC_MONETARY=English_United States.1252 LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] tools_3.3.2
> install.packages("quanteda")
Installing package into ‘C:/Users/kbenoit/Documents/R/win-library/3.3’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.3/quanteda_0.9.9-24.zip'
Content type 'application/zip' length 5567649 bytes (5.3 MB)
downloaded 5.3 MB

package ‘quanteda’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
    C:\Users\kbenoit\AppData\Local\Temp\RtmpA5I5e1\downloaded_packages
anonym0305 commented 7 years ago

Here are all the steps I took...

sessionInfo() R version 3.3.2 (2016-10-31) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 7 x64 (build 7601) Service Pack 1

locale: [1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C
[5] LC_TIME=English_United States.1252

attached base packages: [1] stats graphics grDevices utils datasets methods base

loaded via a namespace (and not attached): [1] RevoUtils_10.0.2 tools_3.3.2

update.packages(ask = FALSE) Warning: package 'RUnit' in library 'C:/Program Files/Microsoft/MRO-3.3.2/library' will not be updated Warning: package 'survival' in library 'C:/Program Files/Microsoft/MRO-3.3.2/library' will not be updated

There are binary versions available but the source versions are later: binary source needs_compilation quanteda 0.9.8.3 0.9.8.5 TRUE R.oo 1.20.0 1.21.0 FALSE survival 2.39-5 2.40-1 TRUE

Binaries will be installed trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/bin/windows/contrib/3.3/quanteda_0.9.8.3.zip' Content type 'application/zip' length 4245276 bytes (4.0 MB) downloaded 4.0 MB

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/bin/windows/contrib/3.3/survival_2.39-5.zip' Content type 'application/zip' length 4813745 bytes (4.6 MB) downloaded 4.6 MB

package ‘quanteda’ successfully unpacked and MD5 sums checked package ‘survival’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in C:\Users\s\AppData\Local\Temp\Rtmpe2bIyl\downloaded_packages installing the source package ‘R.oo’

trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/src/contrib/R.oo_1.21.0.tar.gz' Content type 'application/octet-stream' length 403410 bytes (393 KB) downloaded 393 KB

Error : .onLoad failed in loadNamespace() for 'RevoUtilsMath', details: call: NULL error: To use RevoUtilsMath you must first install the MKL Math Library. Visit http://mran.revolutionanalytics.com/download. If you have previously installed the MKL Math Library, remove it using Add/Remove Programs, then re-install. Error: package or namespace load failed for 'RevoUtilsMath' Execution halted

The downloaded source packages are in ‘C:\Users\s\AppData\Local\Temp\Rtmpe2bIyl\downloaded_packages’ Warning messages: 1: running command '"C:/PROGRA~1/MICROS~4/MRO-33~1.2/bin/x64/R" CMD INSTALL -l "C:\Users\s\Documents\R\win-library\3.3" C:\Users\s\AppData\Local\Temp\Rtmpe2bIyl/downloaded_packages/R.oo_1.21.0.tar.gz' had status 1 2: In install.packages(update[instlib == l, "Package"], l, repos = repos, : installation of package ‘R.oo’ had non-zero exit status

install.packages("quanteda") Installing package into ‘C:/Users/s/Documents/R/win-library/3.3’ (as ‘lib’ is unspecified)

There is a binary version available but the source version is later: binary source needs_compilation quanteda 0.9.8.3 0.9.8.5 TRUE

Binaries will be installed trying URL 'https://mran.revolutionanalytics.com/snapshot/2016-11-01/bin/windows/contrib/3.3/quanteda_0.9.8.3.zip' Content type 'application/zip' length 4245276 bytes (4.0 MB) downloaded 4.0 MB

package ‘quanteda’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in C:\Users\s\AppData\Local\Temp\Rtmpe2bIyl\downloaded_packages

devtools::install_github("kbenoit/LIWCalike") Downloading GitHub repo kbenoit/LIWCalike@master from URL https://api.github.com/repos/kbenoit/LIWCalike/zipball/master Installing LIWCalike "C:/PROGRA~1/MICROS~4/MRO-33~1.2/bin/x64/R" --no-site-file --no-environ \ --no-save --no-restore --quiet CMD INSTALL \ "C:/Users/s/AppData/Local/Temp/Rtmpe2bIyl/devtools1d2c1f0e6419/kbenoit-LIWCalike-446aa9f" \ --library="C:/Users/s/Documents/R/win-library/3.3" --install-tests

Error : .onLoad failed in loadNamespace() for 'RevoUtilsMath', details: call: NULL error: To use RevoUtilsMath you must first install the MKL Math Library. Visit http://mran.revolutionanalytics.com/download. If you have previously installed the MKL Math Library, remove it using Add/Remove Programs, then re-install. Error: package or namespace load failed for 'RevoUtilsMath' Execution halted Error: Command failed (1)

kbenoit commented 7 years ago

Maybe the problem is that the Revolution Analytics repository has only an old version of quanteda?

Try 

chooseCRANmirror()

and select a more "standard" CRAN mirror.

Also you can try installing the GitHub version, see the instructions at https://github.com/kbenoit/quanteda.

anonym0305 commented 7 years ago

quanteda .9.9.24 is installed, but the error's still there.

library("quanteda", lib.loc="~/R/win-library/3.3") quanteda version 0.9.9.24 Using 3 of 4 cores for parallel computing

Attaching package: ‘quanteda’

The following object is masked from ‘package:utils’:

View

The following object is masked from ‘package:base’:

sample

devtools::install_github("kbenoit/LIWCalike") Downloading GitHub repo kbenoit/LIWCalike@master from URL https://api.github.com/repos/kbenoit/LIWCalike/zipball/master Installing LIWCalike "C:/PROGRA~1/MICROS~4/MRO-33~1.2/bin/x64/R" --no-site-file --no-environ --no-save --no-restore \ --quiet CMD INSTALL \ "C:/Users/svaid/AppData/Local/Temp/Rtmpe2bIyl/devtools1d2c5c5a2f1f/kbenoit-LIWCalike-446aa9f" \ --library="C:/Users/svaid/Documents/R/win-library/3.3" --install-tests

Error : .onLoad failed in loadNamespace() for 'RevoUtilsMath', details: call: NULL error: To use RevoUtilsMath you must first install the MKL Math Library. Visit http://mran.revolutionanalytics.com/download. If you have previously installed the MKL Math Library, remove it using Add/Remove Programs, then re-install. Error: package or namespace load failed for 'RevoUtilsMath' Execution halted Error: Command failed (1)

kbenoit commented 7 years ago

I'm not sure what you are using, but it looks like the Revolution Analytics build or at least the libraries. I'd try (re)installing the MKL Math Library from the website in the error message.

Maybe reinstall R?

anonym0305 commented 7 years ago

I almost installed LIWCalike, but got stuck at RcppArmadillo, pls see bottom. I tried to install an earlier version RcppArmadillo but I'm still stuck.

install.packages("RcppArmadillo", version ='0.6.700.6.0',repos='http://cran.us.r-project.org')

devtools::install_github("kbenoit/LIWCalike") Downloading GitHub repo kbenoit/LIWCalike@master from URL https://api.github.com/repos/kbenoit/LIWCalike/zipball/master Installing LIWCalike trying URL 'https://cran.revolutionanalytics.com/src/contrib/quanteda_0.9.9-24.tar.gz' Content type 'application/octet-stream' length 4644119 bytes (4.4 MB)

downloaded 4.4 MB

Installing quanteda trying URL 'https://cran.revolutionanalytics.com/src/contrib/RcppArmadillo_0.7.700.0.0.tar.gz' Content type 'application/octet-stream' length 1075328 bytes (1.0 MB)

downloaded 1.0 MB

Installing RcppArmadillo '/share/apps/R-3.3.2/lib64/R/bin/R' --no-site-file --no-environ --no-save \ --no-restore --quiet CMD INSTALL \ '/tmp/RtmpKvMnXe/devtools76e5507a4847/RcppArmadillo' \ --library='/home/s/R/x86_64-pc-linux-gnu-library/3.3' --install-tests

kbenoit commented 7 years ago

Don't need these to install either package, only this:

install.packages("quanteda")
devtools::install_github("kbenoit/LIWCalike")