macos omnipose gui make segmentation fault

kevinjohncutler / omnipose

Omnipose: a high-precision solution for morphology-independent cell segmentation

https://omnipose.readthedocs.io

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macos omnipose gui make segmentation fault #81

Open mxardre opened 4 months ago

mxardre commented 4 months ago

Hello Running omnipose on macos. Installation in a conda env, etc. When opening the gui anr running segmentation with the sample image I got a segmentation fault. I tried to reinstall pytorch. Try to make again the install in a fresh env but still crash.

Any thoughts?

Attached crash report. crash_report.txt

mxardre commented 4 months ago

sloved this with a colaborator (greating to Octavio). After the installation of Omnipose run also: conda install pytorch -c pytorch conda install torchvision -c pytorch pip install chardet

cstrlln commented 2 months ago

Just wanted to say @mxardre solution worked for me as well.