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khanlab
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neuroglia-helpers
Helper and wrapper scripts for using Singularity locally and on compute canada
GNU General Public License v3.0
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FIX: avoid empty --dependency flag
#33
akhanf
closed
1 year ago
1
fix for apptainer in shub-cache scripts
#32
akhanf
closed
1 year ago
1
Apptainer migration
#31
akhanf
closed
1 year ago
0
Migration to Apptainer on graham
#30
akhanf
closed
1 year ago
0
SINGULARITY_BINDPATH should include `/local:/local`
#29
pvandyken
closed
1 year ago
0
Delete snakemake
#28
akhanf
closed
2 years ago
1
Remove snakemake executable
#27
pvandyken
closed
2 years ago
7
remove --cifti-output from fmriprep options
#26
akhanf
closed
2 years ago
0
add fmriprep 21.0.0
#25
akhanf
closed
2 years ago
0
fix resources for mdt
#24
akhanf
closed
2 years ago
0
add patched mdt-bids for snakedwi
#23
akhanf
closed
2 years ago
0
add hippunfold_v0.5.1 container
#22
akhanf
closed
2 years ago
0
update to v1.0.0 for cfmm2tar
#21
akhanf
closed
2 years ago
0
add fmriprep 20.2.5
#20
akhanf
closed
3 years ago
0
[BUG] Fix inability to set `min_avgmb`
#19
kaitj
closed
3 years ago
0
add github actions to validate bids-apps.tsv
#18
yinglilu
closed
4 years ago
0
Bids apps tsv fix
#17
akhanf
closed
4 years ago
0
New tools to assist with project space migration
#16
akhanf
closed
4 years ago
0
graham_lpalaniy.cfg
#15
kaitj
closed
4 years ago
0
Update singularity/3.2 to singularity/3.4
#14
kaitj
closed
4 years ago
0
update version
#13
patrick-g-h
closed
4 years ago
2
fix remaining tsv errors
#12
akhanf
closed
5 years ago
0
Generalize jupyter flag for regularInteractive
#11
kaitj
closed
5 years ago
0
Update bids-apps.tsv
#10
switt4
closed
5 years ago
0
WIP: Make the default cfg file more general
#9
isolovey
closed
5 years ago
8
bidsBatch missing directory
#8
drmarcj
closed
5 years ago
1
regularInteractive Jupyter
#7
kaitj
closed
5 years ago
0
upgraded to allow custom configuration, consolidated helper functions, reorganization
#6
akhanf
closed
5 years ago
0
add gpu option
#5
kaitj
closed
5 years ago
0
merge latest master branch into newjobtemplates
#4
akhanf
closed
5 years ago
0
flag for interactive visualization
#3
kaitj
closed
6 years ago
0
provenance for bidsBatch runs
#2
akhanf
opened
6 years ago
0
getDicomTarballs password doesn't handle special characters
#1
AlanKuurstra
closed
6 years ago
2