kmayerb tcrdist2 issues

kmayerb / tcrdist2

Quantifiable predictive features define epitope-specific T cell receptor repertoires

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Bump certifi from 2019.3.9 to 2022.12.7

#66 dependabot[bot] opened 1 year ago
0
Bump nbconvert from 5.5.0 to 6.5.1

#65 dependabot[bot] opened 2 years ago
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Bump nbconvert from 5.5.0 to 6.3.0

#64 dependabot[bot] closed 2 years ago
1
Bump mistune from 0.8.4 to 2.0.3

#63 dependabot[bot] opened 2 years ago
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Bump numpy from 1.16.2 to 1.22.0 in /docs

#62 dependabot[bot] opened 2 years ago
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Bump numpy from 1.18.1 to 1.22.0

#61 dependabot[bot] opened 2 years ago
0
Bump numpy from 1.18.1 to 1.21.0

#60 dependabot[bot] closed 2 years ago
1
Bump notebook from 5.7.8 to 6.4.12

#59 dependabot[bot] opened 2 years ago
0
Bump notebook from 5.7.8 to 6.4.10

#58 dependabot[bot] closed 2 years ago
1
Bump ipython from 5.8.0 to 7.16.3

#57 dependabot[bot] opened 2 years ago
0
Bump jupyterlab from 0.33.11 to 1.2.21

#56 dependabot[bot] opened 3 years ago
0
Bump py from 1.8.0 to 1.10.0

#55 dependabot[bot] opened 3 years ago
0
Bump pygments from 2.4.2 to 2.7.4

#54 dependabot[bot] opened 3 years ago
0
Bump jinja2 from 2.10.1 to 2.11.3

#53 dependabot[bot] opened 3 years ago
0
Bump bleach from 3.1.4 to 3.3.0

#52 dependabot[bot] opened 3 years ago
0
Bump notebook from 5.7.8 to 6.1.5

#51 dependabot[bot] closed 2 years ago
1
Tidy

#50 kmayerb closed 4 years ago
0
Cleanup Repertoire Add Short Examples

#49 kmayerb closed 4 years ago
1
remove date [skip ci]

#48 kmayerb closed 4 years ago
0
change doc header [skip ci]

#47 kmayerb closed 4 years ago
0
Added vj_surprise

#46 agartland closed 4 years ago
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MAJOR add tcrdist/vj_diff.py interface with tcrsampler

#45 kmayerb closed 4 years ago
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Update docs [ci skip]

#44 kmayerb closed 4 years ago
0
Change coverage directory

#43 kmayerb closed 4 years ago
0
Api gd

#42 kmayerb closed 4 years ago
0
Add Docs for Using tcrdist2 func

#41 kmayerb closed 4 years ago
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Update Docs with New Archive/Reload

#40 kmayerb closed 4 years ago
1
Actively updating the example notebook for hierdiff

#39 agartland opened 4 years ago
0
SEN -> TSNE

#38 kmayerb closed 4 years ago
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Force TSNE to use precomputed distance matrix

#37 kmayerb closed 4 years ago
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Add exploration plot

#36 kmayerb closed 4 years ago
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new module explore.py

#35 kmayerb closed 4 years ago
0
Integration of functions from hierdiff

#34 agartland closed 4 years ago
0
TCRcodon for reverse translation

#33 kmayerb closed 4 years ago
1
Re-wrote module for computing pairwise distances

#32 agartland closed 4 years ago
1
Add Hotstart Docs + Test

#31 kmayerb closed 4 years ago
0
edit pGen.rst

#30 kmayerb closed 4 years ago
0
Add RST page for pGen

#29 kmayerb closed 4 years ago
1
Api2 deduplicate

#28 kmayerb closed 4 years ago
0
Add mixcr tools,test, and doc for bulk data

#27 kmayerb closed 4 years ago
0
Api2 kdev

#26 kmayerb closed 4 years ago
1
Testing for categorical variable associations

#25 agartland closed 4 years ago
1
Fix hdf5

#24 agartland closed 4 years ago
0
Added gamma/delta symbols to pairing plot

#23 agartland closed 4 years ago
0
Bump bleach from 3.1.1 to 3.1.4

#22 dependabot[bot] closed 4 years ago
0
Bump bleach from 3.1.1 to 3.1.2

#21 dependabot[bot] closed 4 years ago
1
Need To Update alphabet_db file

#20 kmayerb opened 4 years ago
1
Bump bleach from 1.4.2 to 3.1.1

#19 dependabot[bot] closed 4 years ago
0
Conda installation can be tricky: YAML attached

#18 wyattmcdonnell opened 4 years ago
1
Api2 l dev

#17 liel-cohen closed 4 years ago
0