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kundajelab
/
dragonn
A toolkit to learn how to model and interpret regulatory sequence data using deep learning.
http://kundajelab.github.io/dragonn/
MIT License
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conda install not working for python 3.6 / tutorial not working for python 2.7(dragonn0.1.1)
#70
Siebr
closed
11 months ago
2
Bump tensorflow-gpu from 2.7.2 to 2.12.0
#69
dependabot[bot]
opened
1 year ago
0
Bump tensorflow-gpu from 2.7.2 to 2.9.3
#68
dependabot[bot]
closed
1 year ago
1
Multiple Motif Detection in DragoNN Simulated Data
#67
GoktugGuvercin
opened
2 years ago
0
Installation Problem
#66
NazimBL
opened
2 years ago
0
Bump tensorflow-gpu from 1.15 to 2.7.2
#65
dependabot[bot]
closed
2 years ago
0
Bump tensorflow-gpu from 1.15 to 2.6.4
#64
dependabot[bot]
closed
2 years ago
1
Bump tensorflow-gpu from 1.15 to 2.5.3
#63
dependabot[bot]
closed
2 years ago
1
Bump tensorflow-gpu from 1.15 to 2.5.2
#62
dependabot[bot]
closed
2 years ago
1
Installation problem with conda
#61
ihuraraquax
opened
4 years ago
1
Citation for DragoNN
#60
oriolfornes
closed
5 years ago
1
Error when Training Model
#59
ymkng
opened
5 years ago
0
Trouble running training example
#58
ymkng
closed
5 years ago
0
Fixed bug in plot_snp_interpretation
#57
soumyakundu
opened
5 years ago
0
Keras 2.2 tensorflow 1.6 purekeras
#56
annashcherbina
closed
5 years ago
0
Potential fix for 1-based nature of BQTL index
#55
AvantiShri
closed
5 years ago
1
Keras 2.2 tensorflow 1.6 purekeras
#54
annashcherbina
closed
5 years ago
0
bad link for google collaboratory tutorial
#53
dridk
closed
5 years ago
1
Fix travis build
#52
chrisprobert
closed
6 years ago
1
workshop_tutorial.ipynb throwing ValueError
#51
jeffmylife
opened
6 years ago
1
paper supplement README and missing images in primer notebook
#50
jisraeli
closed
6 years ago
0
Notebook tutorial for the primer
#49
jisraeli
closed
6 years ago
0
conflict error
#48
norikaisa
opened
6 years ago
0
problem with interpret
#47
matan8
opened
6 years ago
5
fixed typo, auPRG to auPRC
#46
kiminsigne-ucla
closed
6 years ago
0
typo in hyperparameter_search.py
#45
kiminsigne-ucla
closed
6 years ago
2
SequenceDNN intuition
#44
rbharath
closed
6 years ago
2
Errors in installing Dragonn:
#43
gladex
closed
6 years ago
1
issue when running dragonn train...
#42
hainguyenct
opened
6 years ago
3
Deep network for retroelement insertion motifs
#41
avifriedlich
opened
7 years ago
0
Problems installing bleeding edge of DragoNN
#40
jakeyeung
closed
7 years ago
1
Workshop Tutorial example not working
#39
knoxnox
opened
7 years ago
0
dragonn running issue
#38
huqiwen0313
closed
6 years ago
6
Python setup.py installation issue for bleeding edge dragonn
#37
rodriguesk
closed
7 years ago
2
regression
#36
xuebingwu
closed
6 years ago
3
GTC tutorial materials
#35
jisraeli
closed
7 years ago
0
Minor grammar suggestions for installation of DragoNN AWS instance
#34
dylanmmarshall
opened
7 years ago
1
Roadmap for 0.1.3 release
#33
jisraeli
opened
7 years ago
1
upgraded deeplift version and input reference to 40% GC
#32
jisraeli
closed
7 years ago
0
Anaconda installation ships with incorrect keras installation
#31
rmovva
opened
7 years ago
3
Simulation guidance
#30
agitter
closed
7 years ago
8
Fix readme typos
#29
agitter
closed
7 years ago
0
Travis CI tests in Python 2.7 and 3.5
#28
agitter
closed
7 years ago
2
DragoNN with multiple GPUs
#27
satroz
closed
7 years ago
1
Trouble executing DragoNN
#26
hussius
opened
7 years ago
10
updated paper supplement
#25
jisraeli
closed
7 years ago
0
architectures test with random sequences and labels; updated dependencies
#24
jisraeli
closed
7 years ago
0
Highlight true motif locations in workshop tutorial; support for scikit < 0.18; test sequence generation; fixed golden results now that simdna is deterministic
#23
Wainberg
closed
7 years ago
0
Python3 compatibility, reproducibility tests, and minor bug fixes
#22
jisraeli
closed
7 years ago
0
Error in load exist model
#21
adamtongji
closed
7 years ago
2
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