kushalkolar / MESmerize

Platform for Calcium Imaging analysis. DEPRECATED.
GNU General Public License v3.0
58 stars 14 forks source link

[FEATURE REQUEST] Is it possible to load several tiffs simultaneously #97

Closed maristanye closed 2 years ago

maristanye commented 2 years ago

Hi,

each trial of an imaging session is saved as a single tiff file in my system (if I do 100 trials=100 files). From the Youtube tutorial it seems that these might need to be concatenated beforehand to be loaded as a single tiff file in Mesmerize. Is this correct or can one load several tiff files simultaneously and these will be concatenated?

Best and thanks, Eduardo

kushalkolar commented 2 years ago

Yes you'll need to concat them yourself, you can just use tifffile.imread, np.concatenate, and tifffile.imwrite.

On Wed, Apr 13, 2022, 06:10 maristanye @.***> wrote:

Assigned #97 https://github.com/kushalkolar/MESmerize/issues/97 to @kushalkolar https://github.com/kushalkolar.

— Reply to this email directly, view it on GitHub https://github.com/kushalkolar/MESmerize/issues/97#event-6426077392, or unsubscribe https://github.com/notifications/unsubscribe-auth/ACHXXRARHOIBYYJ5KZRANM3VE2MSHANCNFSM5TKEZHFA . You are receiving this because you were assigned.Message ID: @.***>