New Mesmerize Packages

The Mesmerize desktop application within this repo is no longer supported. Please checkout the new mesmerize packages which have longterm support.

These new packages are much easier to install! They are also much more efficient, versatile, and offer rich visualizations.

The batch management system offered by the new package is conceptually similar to the original Mesmerize desktop application, but it is much more efficient.

mesmerize-core: https://github.com/nel-lab/mesmerize-core \ mesmerize-viz: https://github.com/kushalkolar/mesmerize-viz

mesmerize-viz is the new "GUI"

Motion correction visualization using mesmerize-viz

https://github.com/nel-lab/mesmerize-core/assets/9403332/34413fa4-6041-4418-ab66-ddd7dca03e19

Explore CNMF variants

https://github.com/nel-lab/mesmerize-core/assets/9403332/3453d6fb-0dae-4520-b2c2-8156d8ce7b58

CNMF Componment Evaluation

https://github.com/nel-lab/mesmerize-core/assets/9403332/b6e8f6df-6bd4-4167-96eb-38c5095c8770

gSig_filt viz for 1p mcorr

https://user-images.githubusercontent.com/9403332/231554268-2f0fa7f3-0286-4195-b316-bcdea5921771.mp4

corr-pnr image viz for 1p CNMFE seeding

https://user-images.githubusercontent.com/9403332/231554275-4894e728-dbe1-4a2d-8f6f-1896e753f903.mp4