lcdb / lcdb-wf

Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis

https://lcdb.github.io/lcdb-wf

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`lcdb-wf`

A collection of snakemake workflows and tools for common high-throughput sequencing analysis, along with associated infrastructure.

See docs at https://lcdb.github.io/lcdb-wf.

References workflow

DAG for references workflow:

references dag

RNA-seq workflow

DAG for RNA-seq workflow:

rnaseq dag

ChIP-seq workflow

DAG for ChIP-seq workflow:

chipseq dag