lhilbert / EnhancerShoeBox

Molecular Dynamics Simulations of Enhancer-Promoter Interactions in a Model Shoe Box
MIT License
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Empty output folders in actin simulations #11

Open ezingrebe opened 4 months ago

ezingrebe commented 4 months ago

Running:

python3 run_single_ACTIN_SMALL_BOX_Nils.py -b 11 -r 1 -t 10 -o output/ -m 1 -c Control -p 3 -a 30 -x 80

generates "output" directory, with "run1" subdirectory. The "run1" contains two further subdirectories: "dump_files" and "summaries". However, both are empty and do not contain any output files.

Are those directories necessary? Or is it an artifact that should be removed from the script?