improvements to breakpoint distance plots

liampshaw / mobile-gene-regions

Analysing the genomic context of mobile genes

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Open liampshaw opened 1 year ago

liampshaw commented 1 year ago

possible changes:

move the SNP comparison table so it doesn't block plot
stop the cdf line going to zero at the limits (implies a breakpoint which isn't there)
separate upstream/downstream plots by true width of gene
make interactive so can select a single SNP comparison and/or select a subset of comparisons by metadata (e.g. only Escherichia-Escherichia comparisons)

liampshaw commented 1 year ago

currently

Screenshot 2023-05-04 at 13 44 12

liampshaw commented 11 months ago

update:

NOT DONE move the SNP comparison table so it doesn't block plot
NOT DONE stop the cdf line going to zero at the limits (implies a breakpoint which isn't there)
NOT DONE separate upstream/downstream plots by true width of gene
DONE make interactive so can select a single SNP comparison and/or select a subset of comparisons by metadata (e.g. only Escherichia-Escherichia comparisons)