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liaoherui
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VirStrain
An RNA virus strain-level identification tool for short reads.
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-022-02609-x
MIT License
19
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Virstrain build sites cutoff default value.
#18
MTDouglas
opened
2 months ago
1
How to know if Other possible strain is highly supported?
#17
lanadelrea
opened
4 months ago
2
request to add argument to print the version
#16
Rohit-Satyam
closed
4 months ago
3
No such file or directory: 'dengue_db/dscl.json'
#15
Rohit-Satyam
closed
7 months ago
1
revision required for help section of VirStrain_contig and error resolution for "Could not open read file "../database//merge_db.fa" for reading; skipping"
#14
Rohit-Satyam
closed
5 months ago
14
(-1)* strain number
#13
adelizamae
opened
12 months ago
2
Creating custom database duration
#12
abulenciamiguel
closed
1 year ago
4
Error in database generation
#11
abulenciamiguel
closed
1 year ago
6
Error in database generation 2
#10
minhtrung1997
closed
1 year ago
3
Vscore missing
#9
KasperH2
closed
1 year ago
8
RuntimeWarning: invalid value encountered in true_divide
#8
KasperH2
closed
1 year ago
4
No longer able to download VirStrain_DB.tar.gz via git lfs
#7
niemasd
closed
2 years ago
3
No such file or directory
#6
niemasd
closed
2 years ago
6
Added shebangs and made scripts executable
#5
niemasd
closed
2 years ago
1
Create LICENSE
#4
liaoherui
closed
2 years ago
0
Error in database generation
#3
KasperH2
closed
3 years ago
3
Long-read support
#2
Balays
closed
3 years ago
1
Use of uninitialized value $char in pattern match (m//) at bin/aln2cluster-overlap-kmer-withd.pl line 80.
#1
KasperH2
closed
3 years ago
10