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libnano
/
primer3-py
Simple oligo analysis and primer design
https://libnano.github.io/primer3-py
GNU General Public License v2.0
166
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`p3helpers.pyx` houses new sequence and design helper functions
#93
grinner
closed
1 year ago
0
`setup.py` `package_data` and `MANIFEST.in` updated to reflect package data for conda build from PyPi
#92
grinner
closed
1 year ago
0
1.1.0 release
#91
grinner
closed
1 year ago
0
Version bump to 1.1.0 and `CHANGES` update
#90
grinner
closed
1 year ago
0
python 3.8 wheel support
#89
grinner
closed
1 year ago
0
Wheels for python 3.8
#88
elliot-hallmark
closed
1 year ago
1
added specificity to error non-N IUPAC error for issue 59
#87
grinner
closed
1 year ago
0
Removed `conda install` instructions in `quickstart.md` and fix typo
#86
grinner
closed
1 year ago
0
v1.0.0 `__version__` update
#85
grinner
closed
1 year ago
0
1.0.0 version update
#84
grinner
closed
1 year ago
0
`CHANGES` finalization for 1.0.0 release. Markdown badge fixes in `README.md`
#83
grinner
closed
1 year ago
0
Fix PyPi Python build version
#82
benpruitt
closed
1 year ago
0
`build-wheels-pypi.yml` added to build wheels and upload to PyPi on tagging
#81
grinner
closed
1 year ago
0
`MANIFEST` file update to ensure build and that files are not missing
#80
grinner
closed
1 year ago
0
Misc. documentation + import fixes
#79
benpruitt
closed
1 year ago
0
Windows test compatibility
#78
benpruitt
closed
1 year ago
0
Added `examples/` folder with 2 sample modules
#77
grinner
closed
1 year ago
1
Fix windows build
#76
benpruitt
closed
1 year ago
0
documentation updates pass 2 for `1.0.0-staging`
#75
grinner
closed
1 year ago
0
Test coverage improvements
#74
benpruitt
closed
1 year ago
0
docs update for 1.0.0 and conversion from Sphinx ReST to MyST
#73
grinner
closed
1 year ago
0
code clarity and comments update. `*_main.c` argument parsing fixes
#72
grinner
closed
1 year ago
0
Added `test_ntthal_io` to test conformity and validity of `primer3-py` changes to `thal.c`
#71
grinner
closed
1 year ago
0
merged `primerdesign.pyx` into `thermoanalysis.pyx`.
#70
grinner
closed
1 year ago
0
updates for `primer3` 2.6.1 and c-API code to `cython` module conversion for `primerdesign`
#69
grinner
closed
1 year ago
0
`kw_only` dataclass fix primer3 py arguments
#68
grinner
closed
1 year ago
0
Remove `PRIMER3HOME` in favor of package-relative paths
#67
benpruitt
closed
1 year ago
0
Unify global defaults in new `argdefaults.py` module.
#66
grinner
closed
1 year ago
0
type hinting, `cython` style update, `pre-commit` `mypy`
#65
grinner
closed
1 year ago
0
`isort` added to `pre-commit` hooks
#64
grinner
closed
1 year ago
0
`pre-commit` hooks initial and GitHub Action transition from Travis
#63
grinner
closed
1 year ago
0
add .whl files for python 3.9 and 3.10 in windows
#62
wpwupingwp
closed
1 year ago
1
How to know which part is the hairpin sequence?
#61
yangtcai
closed
1 year ago
1
Cannot input list of ranges
#60
danfulop
closed
1 year ago
1
Message "Unrecognized base in input sequence" omits problem char
#59
peterjc
closed
1 year ago
2
Wheels for python 3.9+
#58
JacobHayes
closed
2 years ago
2
Can `primer3-py` support the degenerate base design ?
#57
kevin2022lee
closed
1 year ago
8
primer3 2.6.0 feature
#56
sanjaynagi
closed
1 year ago
1
bad link in quickstart documentation
#55
diekhans
closed
1 year ago
1
Fix typo
#54
peterjc
closed
1 year ago
1
ctypes version is a little faster
#53
chenzhiw
closed
2 years ago
3
Mispriming library causes primer3-py to crash
#52
danxfreeman
closed
1 year ago
3
SEQUENCE_OVERLAP_JUNCTION_LIST
#51
juechenyang
closed
1 year ago
3
Nested structure for primer results
#50
peterjc
closed
1 year ago
6
primer3 moved from sourceforge to GitHub
#49
peterjc
closed
1 year ago
5
Update to 2.5.0
#48
jsnedeco
closed
1 year ago
2
Documentation issues
#47
InvisOn
closed
1 year ago
1
add calcEndStability to __init__.py
#46
stephen-tanner
closed
1 year ago
1
Fix minor typo: pervious -> previous
#45
hartzell
closed
1 year ago
1
Different dimers from ntthal
#44
billzt
closed
1 year ago
1
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