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lowe-lab-ucl
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cellx-predict
Explainable AI model of cell behavior
BSD 3-Clause "New" or "Revised" License
20
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10
forks
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make augmentation optional
#47
quantumjot
closed
1 year ago
0
Convert tfrecord filepaths from `PosixPath` to `str` type
#46
laureho
closed
1 year ago
0
saved models directly in addition to model weights
#45
chris-soelistyo
opened
1 year ago
0
inference dataset
#44
sgc123
opened
1 year ago
0
updated log file with tfrecord files
#43
chris-soelistyo
closed
1 year ago
2
List tfrecord files in log file
#42
quantumjot
closed
1 year ago
1
update citation
#41
quantumjot
opened
2 years ago
1
dataset not available
#40
fuujiro
closed
2 years ago
1
Add `input_dtype` parameter for image data
#39
laureho
closed
2 years ago
2
Add Encoding dataclass and allow multiple output types
#38
quantumjot
closed
2 years ago
0
allow other datatypes while training the encoder
#37
quantumjot
closed
2 years ago
0
directly save encoder and decoder models, as well as weights
#36
quantumjot
opened
2 years ago
0
consider changing config dataclasses to pydantic
#35
quantumjot
opened
2 years ago
1
update Dockerfile with git
#34
quantumjot
closed
2 years ago
1
Ease the training grid search
#33
KristinaUlicna
closed
2 years ago
7
add notebook to demonstrate patch saving in tfrecord format
#32
quantumjot
opened
2 years ago
1
update inference notebook
#31
quantumjot
opened
2 years ago
0
fix btrack link in README
#30
quantumjot
closed
2 years ago
0
expose input_shape and add config tests
#29
quantumjot
closed
2 years ago
1
remove hardcoded values
#28
quantumjot
closed
2 years ago
1
expose all configuration parameters to command line
#27
quantumjot
closed
2 years ago
0
Featuer/dockercompose
#26
DevNinja5
opened
2 years ago
2
Support for docker-compose
#25
DevNinja5
opened
2 years ago
0
update Dockerfile
#24
quantumjot
closed
2 years ago
0
add more documentation about data structure
#23
quantumjot
opened
2 years ago
1
update workflow to add pytest
#22
quantumjot
closed
2 years ago
0
add dataset and train files
#21
chris-soelistyo
closed
2 years ago
0
add pytest to workflow
#20
quantumjot
closed
2 years ago
0
add a config file to allow inference using scivision
#19
quantumjot
opened
2 years ago
1
add inference notebook
#18
quantumjot
closed
2 years ago
0
added docstrings to visualization and interpretation
#17
chris-soelistyo
closed
2 years ago
1
change input parameter name from `input`
#16
quantumjot
closed
2 years ago
0
Add codebase
#15
quantumjot
closed
2 years ago
0
Update setup
#14
quantumjot
closed
2 years ago
0
Add Dockefile and shell scripts
#13
quantumjot
closed
2 years ago
0
add docstrings to `visualize.py` and `interpretation.py`
#12
quantumjot
closed
2 years ago
0
Update README
#11
quantumjot
closed
2 years ago
0
add badges
#10
quantumjot
closed
2 years ago
0
add tests
#9
quantumjot
closed
2 years ago
0
add workflow
#8
quantumjot
closed
2 years ago
0
update requirements to python>=3.7
#7
quantumjot
closed
2 years ago
1
add core code to cellx library
#6
quantumjot
closed
2 years ago
1
add Dockerfile and shell scripts
#5
quantumjot
closed
2 years ago
0
add a workflow to run linting and tests
#4
quantumjot
closed
2 years ago
0
Update the repo structure
#3
quantumjot
closed
2 years ago
0
Add latent space interpretation
#2
chris-soelistyo
closed
2 years ago
0
added pre-commits
#1
chris-soelistyo
closed
2 years ago
0