mansuylab / SC_postnatal_adult

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Comparison of RNA-seq data with the lab's and literature's #45

Open dktanwar opened 3 years ago

dktanwar commented 3 years ago

Comparions to make

Log fold-change comparison

[x] PND15 vs PND8 (new) and PND14 vs PND7 (lit)
[x] PND15 vs PND8 (new) and PND15 vs PND8 (lab)
[x] PND15 vs PND8 (lab) and PND14 vs PND7 (lit)
[x] PNW21 vs PND15 (new) and PNW8 vs PND14 (lit)

Expression comparison

[x] PND8(new) vs PND7 (lit)
[x] PND8(lab) vs PND7 (lit)
[x] PND8(new) vs PND8(lab)
[x] PND15(new) vs PND14 (lit)
[x] PND15(lab) vs PND14 (lit)
[x] PND15(new) vs PND15(lab)
[x] PNW21(new) vs PNW8 (lit)

Heatmap

[x] Heatmap of some marker genes across all the data, including PNW21 (polyA)