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marbl
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verkko
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segmentation fault during consensus
#266
bernardo1963
closed
2 days ago
6
Error in rule combineConsensus:
#265
wsd2345
closed
1 week ago
4
Segmentation fault
#264
chunlinxiao
closed
2 days ago
3
Too many missing genes
#263
hanqu24
opened
2 weeks ago
4
TabError in file <string>, line 97:
#262
WengangXbio
closed
1 week ago
2
Assembly more fragmented than expected
#261
dmacguigan
opened
3 weeks ago
3
assembly.homopolymer-compressed.gfa file?
#260
chunlinxiao
closed
2 weeks ago
7
FASTA output format incompatible with gVolante
#259
dmacguigan
closed
3 weeks ago
3
No module named networkx
#258
dmacguigan
closed
3 weeks ago
5
Passing SBATCH QOS option
#257
dmacguigan
closed
3 weeks ago
2
Help doc clarification
#256
dmacguigan
closed
4 weeks ago
2
Core Dump On SLURM
#255
nickgladman
closed
2 weeks ago
4
ZeroDivisionError in unroll_simple_loops.py
#254
ASUQ
closed
4 weeks ago
3
Is v2.1 available in bioconda?
#253
chunlinxiao
closed
1 month ago
1
AlignTips and genome size
#252
diego-rt
closed
1 month ago
8
tangle removal heuristics quick fix
#251
Dmitry-Antipov
closed
1 month ago
0
Initial porec support
#250
skoren
closed
1 month ago
0
adding multiple childs
#249
gauravcodepro
closed
2 months ago
10
Verkko 2.0 run in HiFi + HiC mode for Philedonides lunana
#248
ksenia-krasheninnikova
closed
1 month ago
15
utgcns segfault at consensus step
#247
galicae
closed
2 months ago
5
Missing indexing in step 8-hicpipeline
#246
rfinkers
closed
2 months ago
1
Questions related to interpretation results phased assembly.
#245
rfinkers
opened
2 months ago
26
unexpected operator 3-align/index.sh
#244
rfinkers
closed
3 months ago
2
K-score in verkko trio mode
#243
DustinSokolowski
closed
2 months ago
2
How to rerun an interrupted task?
#242
KANGYUlab
closed
2 months ago
4
cnspath mode doesn't create/copy all output files
#241
brianwalenz
closed
2 weeks ago
1
no clear error with invalid hapmer files
#240
Dmitry-Antipov
closed
2 months ago
0
alignTipsONT requires optimization
#239
Dmitry-Antipov
closed
2 months ago
0
assigning "-run" acronym to step
#238
DustinSokolowski
closed
2 months ago
4
awk_utilities for pacbiohifi assembly coming from verkko
#237
gauravcodepro
closed
1 month ago
0
Empty piece in scfmap file leads to further crash in combineConsensus.sh
#236
Dmitry-Antipov
closed
3 months ago
1
localrule verkko
#235
nickgladman
closed
3 months ago
2
ERROR: piece missing from gapped contig
#234
olekto
closed
3 months ago
9
processONT: "assert revnode(node) not in hairpins"
#233
grinning-bat
closed
4 months ago
3
incompatibility with the conda environment
#232
gauravcodepro
closed
3 months ago
3
Error of processONT.sh
#231
YouxinZhao
closed
4 months ago
4
processGraph "assert edge[0] not in node_cuts"
#230
grinning-bat
closed
4 months ago
5
5-untip -> get_original_coverage.py -> IndexError
#229
IsaacDiaz026
closed
4 months ago
3
Better error reporting
#228
Dmitry-Antipov
opened
5 months ago
0
error in "ont_resolved_graph.gfa.err"
#227
socialhang
closed
4 months ago
5
Using only ONT
#226
heksaani
closed
5 months ago
1
Issue with Rukki: thread 'main' panicked at 'index out of bounds: the len is 1 but the index is 1'
#225
XingzhengLee
closed
5 months ago
4
Snakemake 8 compatibility
#224
tbenavi1
opened
5 months ago
2
Issue Encountered at sqStoreCreate Step
#223
XingzhengLee
closed
5 months ago
4
more explicit crashes information
#222
Dmitry-Antipov
closed
5 months ago
2
ONT-Only Assembly with Verkko?
#221
cahuparo
closed
6 months ago
1
RED memory usage is high on simplex reads
#220
brianwalenz
closed
6 months ago
0
how to specified the default partion, the canu could work with "gridOptions=" -q big"" ,
#219
Jiangjiangzhang6
closed
6 months ago
4
Rephrase the compile section of README file
#218
jimmymcheung
closed
6 months ago
2
assertionerror insert_aln_gaps verkko v1.4.1
#217
ptrebert
closed
5 months ago
3
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