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marcotcr / checklist

Beyond Accuracy: Behavioral Testing of NLP models with CheckList
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CheckList

This repository contains code for testing NLP Models as described in the following paper:

Beyond Accuracy: Behavioral Testing of NLP models with CheckList
Marco Tulio Ribeiro, Tongshuang Wu, Carlos Guestrin, Sameer Singh Association for Computational Linguistics (ACL), 2020

Bibtex for citations:

 @inproceedings{checklist:acl20,  
 author = {Marco Tulio Ribeiro and Tongshuang Wu and Carlos Guestrin and Sameer Singh},  
 title = {Beyond Accuracy: Behavioral Testing of NLP models with CheckList},  
 booktitle = {Association for Computational Linguistics (ACL)},  
 year = {2020}
 }

Table of Contents

Installation

From pypi: 

pip install checklist
jupyter nbextension install --py --sys-prefix checklist.viewer
jupyter nbextension enable --py --sys-prefix checklist.viewer

Note: --sys-prefix to install into python’s sys.prefix, which is useful for instance in virtual environments, such as with conda or virtualenv. If you are not in such environments, please switch to --user to install into the user’s home jupyter directories.

From source:

git clone git@github.com:marcotcr/checklist.git
cd checklist
pip install -e .

Either way, you need to install pytorch or tensorflow if you want to use masked language model suggestions:

pip install torch

For most tutorials, you also need to download a spacy model:

python -m spacy download en_core_web_sm

Tutorials

Please note that the visualizations are implemented as ipywidgets, and don't work on colab or JupyterLab (use jupyter notebook). Everything else should work on these though.

  1. Generating data
  2. Perturbing data
  3. Test types, expectation functions, running tests
  4. The CheckList process

Paper tests

Notebooks: how we created the tests in the paper

  1. Sentiment analysis
  2. QQP
  3. SQuAD

Replicating paper tests, or running them with new models

For all of these, you need to unpack the release data (in the main repo folder after cloning):

tar xvzf release_data.tar.gz

Sentiment Analysis

Loading the suite:

import checklist
from checklist.test_suite import TestSuite
suite_path = 'release_data/sentiment/sentiment_suite.pkl'
suite = TestSuite.from_file(suite_path)

Running tests with precomputed bert predictions (replace bert on pred_path with amazon, google, microsoft, or roberta for others):

pred_path = 'release_data/sentiment/predictions/bert'
suite.run_from_file(pred_path, overwrite=True)
suite.summary() # or suite.visual_summary_table()

To test your own model, get predictions for the texts in release_data/sentiment/tests_n500 and save them in a file where each line has 4 numbers: the prediction (0 for negative, 1 for neutral, 2 for positive) and the prediction probabilities for (negative, neutral, positive).
Then, update pred_path with this file and run the lines above.

QQP

import checklist
from checklist.test_suite import TestSuite
suite_path = 'release_data/qqp/qqp_suite.pkl'
suite = TestSuite.from_file(suite_path)

Running tests with precomputed bert predictions (replace bert on pred_path with roberta if you want):

pred_path = 'release_data/qqp/predictions/bert'
suite.run_from_file(pred_path, overwrite=True, file_format='binary_conf')
suite.visual_summary_table()

To test your own model, get predictions for pairs in release_data/qqp/tests_n500 (format: tsv) and output them in a file where each line has a single number: the probability that the pair is a duplicate.

SQuAD

import checklist
from checklist.test_suite import TestSuite
suite_path = 'release_data/squad/squad_suite.pkl'
suite = TestSuite.from_file(suite_path)

Running tests with precomputed bert predictions:

pred_path = 'release_data/squad/predictions/bert'
suite.run_from_file(pred_path, overwrite=True, file_format='pred_only')
suite.visual_summary_table()

To test your own model, get predictions for pairs in release_data/squad/squad.jsonl (format: jsonl) or release_data/squad/squad.json (format: json, like SQuAD dev) and output them in a file where each line has a single string: the prediction span.

Testing huggingface transformer pipelines

See this notebook.

Code snippets

Templates

See 1. Generating data for more details.

import checklist
from checklist.editor import Editor
import numpy as np
editor = Editor()
ret = editor.template('{first_name} is {a:profession} from {country}.',
                       profession=['lawyer', 'doctor', 'accountant'])
np.random.choice(ret.data, 3)

['Mary is a doctor from Afghanistan.',
'Jordan is an accountant from Indonesia.',
'Kayla is a lawyer from Sierra Leone.']

RoBERTa suggestions

See 1. Generating data for more details.
In template:

ret = editor.template('This is {a:adj} {mask}.',  
                      adj=['good', 'bad', 'great', 'terrible'])
ret.data[:3]

['This is a good idea.',
'This is a good sign.',
'This is a good thing.']

Multiple masks:

ret = editor.template('This is {a:adj} {mask} {mask}.',
                      adj=['good', 'bad', 'great', 'terrible'])
ret.data[:3]

['This is a good history lesson.',
'This is a good chess move.',
'This is a good news story.']

Getting suggestions rather than filling out templates:

editor.suggest('This is {a:adj} {mask}.',
               adj=['good', 'bad', 'great', 'terrible'])[:5]

['idea', 'sign', 'thing', 'example', 'start']

Getting suggestions for replacements (only a single text allowed, no templates):

editor.suggest_replace('This is a good movie.', 'good')[:5]

['great', 'horror', 'bad', 'terrible', 'cult']

Getting suggestions through jupyter visualization: 

editor.visual_suggest('This is {a:mask} movie.')

visual suggest

Multilingual suggestions

Just initialize the editor with the language argument (should work with language names and iso 639-1 codes):

import checklist
from checklist.editor import Editor
import numpy as np
# in Portuguese
editor = Editor(language='portuguese')
ret = editor.template('O João é um {mask}.',)
ret.data[:3]

['O João é um português.',
'O João é um poeta.',
'O João é um brasileiro.']

# in Chinese
editor = Editor(language='chinese')
ret = editor.template('西游记的故事很{mask}。',)
ret.data[:3]

['西游记的故事很精彩。',
'西游记的故事很真实。',
'西游记的故事很经典。']

We're using FlauBERT for french, German BERT for german, and XLM-RoBERTa for everything else (click the link for a list of supported languages). We can't vouch for the quality of the suggestions in other languages, but it seems to work reasonably well for the languages we speak (although not as well as English).

Lexicons (somewhat multilingual)

editor.lexicons is a dictionary, which can be used in templates. For example:

import checklist
from checklist.editor import Editor
import numpy as np
# Default: English
editor = Editor()
ret = editor.template('{male1} went to see {male2} in {city}.', remove_duplicates=True)
list(np.random.choice(ret.data, 3))

['Dan went to see Hugh in Riverside.',
'Stephen went to see Eric in Omaha.',
'Patrick went to see Nick in Kansas City.']

Person names and location (country, city) names are multilingual, depending on the editor language. We got the data from wikidata, so there is a bias towards names on wikipedia.

editor = Editor(language='german')
ret = editor.template('{male1} went to see {male2} in {city}.', remove_duplicates=True)
list(np.random.choice(ret.data, 3))

['Rolf went to see Klaus in Leipzig.',
'Richard went to see Jörg in Marl.',
'Gerd went to see Fritz in Schwerin.']

List of available lexicons:

editor.lexicons.keys()

dict_keys(['male', 'female', 'first_name', 'first_pronoun', 'last_name', 'country', 'nationality', 'city', 'religion', 'religion_adj', 'sexual_adj', 'country_city', 'male_from', 'female_from', 'last_from'])

Some of these cannot be used directly in templates because they are themselves dictionaries. For example, male_from, female_from, last_from and country_city are dictionaries from country to male names, female names, last names and most populous cities.
You can call editor.lexicons.male_from.keys() for a list of country names. Example usage:

import numpy as np
countries = ['France', 'Germany', 'Brazil']
for country in countries:
    ts = editor.template('{male} {last} is from {city}',
                male=editor.lexicons.male_from[country],
                last=editor.lexicons.last_from[country],
                city=editor.lexicons.country_city[country],
               )
    print('Country: %s' % country)
    print('\n'.join(np.random.choice(ts.data, 3)))
    print()

Country: France
Jean-Jacques Brun is from Avignon
Bruno Deschamps is from Vitry-sur-Seine
Ernest Picard is from Chambéry

Country: Germany
Rainer Braun is from Schwerin
Markus Brandt is from Gera
Reinhard Busch is from Erlangen

Country: Brazil
Gilberto Martins is from Anápolis
Alfredo Guimarães is from Indaiatuba
Jorge Barreto is from Fortaleza

Perturbing data for INVs and DIRs

See 2.Perturbing data for more details.
Custom perturbation function:

import re
import checklist
from checklist.perturb import Perturb
def replace_john_with_others(x, *args, **kwargs):
    # Returns empty (if John is not present) or list of strings with John replaced by Luke and Mark
    if not re.search(r'\bJohn\b', x):
        return None
    return [re.sub(r'\bJohn\b', n, x) for n in ['Luke', 'Mark']]

dataset = ['John is a man', 'Mary is a woman', 'John is an apostle']
ret = Perturb.perturb(dataset, replace_john_with_others)
ret.data

[['John is a man', 'Luke is a man', 'Mark is a man'],
['John is an apostle', 'Luke is an apostle', 'Mark is an apostle']]

General purpose perturbations (see tutorial for more):

import spacy
nlp = spacy.load('en_core_web_sm')
pdataset = list(nlp.pipe(dataset))
ret = Perturb.perturb(pdataset, Perturb.change_names, n=2)
ret.data

[['John is a man', 'Ian is a man', 'Robert is a man'],
['Mary is a woman', 'Katherine is a woman', 'Alexandra is a woman'],
['John is an apostle', 'Paul is an apostle', 'Gabriel is an apostle']]

ret = Perturb.perturb(pdataset, Perturb.add_negation)
ret.data

[['John is a man', 'John is not a man'],
['Mary is a woman', 'Mary is not a woman'],
['John is an apostle', 'John is not an apostle']]

Creating and running tests

See 3. Test types, expectation functions, running tests for more details.

MFT:

import checklist
from checklist.editor import Editor
from checklist.perturb import Perturb
from checklist.test_types import MFT, INV, DIR
editor = Editor()

t = editor.template('This is {a:adj} {mask}.',  
                      adj=['good', 'great', 'excellent', 'awesome'])
test1 = MFT(t.data, labels=1, name='Simple positives',
           capability='Vocabulary', description='')

INV:

dataset = ['This was a very nice movie directed by John Smith.',
           'Mary Keen was brilliant.',
          'I hated everything about this.',
          'This movie was very bad.',
          'I really liked this movie.',
          'just bad.',
          'amazing.',
          ]
t = Perturb.perturb(dataset, Perturb.add_typos)
test2 = INV(**t)

DIR:

from checklist.expect import Expect
def add_negative(x):
    phrases = ['Anyway, I thought it was bad.', 'Having said this, I hated it', 'The director should be fired.']
    return ['%s %s' % (x, p) for p in phrases]

t = Perturb.perturb(dataset, add_negative)
monotonic_decreasing = Expect.monotonic(label=1, increasing=False, tolerance=0.1)
test3 = DIR(**t, expect=monotonic_decreasing)

Running tests directly:

from checklist.pred_wrapper import PredictorWrapper
# wrapped_pp returns a tuple with (predictions, softmax confidences)
wrapped_pp = PredictorWrapper.wrap_softmax(model.predict_proba)
test.run(wrapped_pp)

Running from a file:

# One line per example
test.to_raw_file('/tmp/raw_file.txt')
# each line has prediction probabilities (softmax)
test.run_from_file('/tmp/softmax_preds.txt', file_format='softmax', overwrite=True)

Summary of results:

test.summary(n=1)

Test cases: 400
Fails (rate): 200 (50.0%)

Example fails:
0.2 This is a good idea

Visual summary:

test.visual_summary()

visual summary

Saving and loading individual tests:

# save
test.save(path)
# load
test = MFT.from_file(path)

Custom expectation functions

See 3. Test types, expectation functions, running tests for more details.

If you are writing a custom expectation functions, it must return a float or bool for each example such that:

Expectation on a single example:

def high_confidence(x, pred, conf, label=None, meta=None):
    return conf.max() > 0.95
expect_fn = Expect.single(high_confidence)

Expectation on pairs of (orig, new) examples (for INV and DIR):

def changed_pred(orig_pred, pred, orig_conf, conf, labels=None, meta=None):
    return pred != orig_pred
expect_fn = Expect.pairwise(changed_pred)

There's also Expect.testcase and Expect.test, amongst many others.
Check out expect.py for more details.

Test Suites

See 4. The CheckList process for more details.

Adding tests:

from checklist.test_suite import TestSuite
# assuming test exists:
suite.add(test)

Running a suite is the same as running an individual test, either directly or through a file:

from checklist.pred_wrapper import PredictorWrapper
# wrapped_pp returns a tuple with (predictions, softmax confidences)
wrapped_pp = PredictorWrapper.wrap_softmax(model.predict_proba)
suite.run(wrapped_pp)
# or suite.run_from_file, see examples above

To visualize results, you can call suite.summary() (same as test.summary), or suite.visual_summary_table(). This is what the latter looks like for BERT on sentiment analysis:

suite.visual_summary_table()

visual summary table

Finally, it's easy to save, load, and share a suite:

# save
suite.save(path)
# load
suite = TestSuite.from_file(path)

API reference

On readthedocs

Code of Conduct

Microsoft Open Source Code of Conduct