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VirAnnot was build to ease the assembly, blast search and taxonomic annotation of metagenomic NGS data. It is used in Virologie team of UMR1332 BFP laboratory at INRA. VirAnnot also takes part of the Euphresco project "Plant Health Bioinformatics Network". See more.
It is designed to identify viruses in plant metagenomic data but it can be used to assemble and annotate any sequences with the NCBI taxonomy.
Link to the article
See documentation: https://virannot-docs.readthedocs.io/en/latest/
Pipeline general scheme: