matiasandina / homecage_quantification

Code for quantifying homecage activity
https://github.com/homecage_quantification
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Homecage Quantification

This project contains code to establish a monitoring system based on raspberry Pi 4 and cameras.

If using FED3 devices to quantify food intake, you can also find a data analysis tool in this repository.

Main aspects of Homecage quantification

  1. Acquire video
    • Stream to a local network to be visualized by other computers in the network (via IP).
    • Record video to local file.
  2. Perform optical flow quantification on video.
  3. Record mouse temperature using FLIR lepton 3.5 and openMV.

More modules

  1. Ambient Temperature and Humidity (See here).
  2. Code for analysis of FED3 device (See here)

Usage

For detailed usage refer to the Wiki page.

Contribute

This is a preliminary release. Please file issues to improve the functioning.