matthiaskoenig / cy3sbml

cy3sbml: SBML for Cytoscape 3
GNU Lesser General Public License v3.0
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SIF export for SBML files broken #235

Closed matthiaskoenig closed 6 years ago

matthiaskoenig commented 7 years ago

SIF export in Cytoscape relies on unique names, which is not the case for SBML files (either optional or don't have to be unique).

Provide option for a clean SIF export from SBML files.

See also http://code.cytoscape.org/redmine/issues/1626

Example for missing names here https://www.ebi.ac.uk/biomodels-main/BMID000000141940

matthiaskoenig commented 6 years ago

Won't fix. This is a cytoscape issue. No core functionality. Issue is reported.