Neuronvisio

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What is it

Neuronvisio is a Graphical User Interface for NEURON simulator environment <http://www.neuron.yale.edu/neuron/>_. Neuronvisio connect with NEURON using the new python NEURON interface.

Features

• 3D visualization of the model with the possibility to change it runtime
• Creation of vectors to record any variables present in the section
• Pylab integration to plot directly the result of the simulation
• Exploration of the timecourse of any variable among time using a color coded scale
• the GUI runs in its own thread so it's possible to use the console (integrated with IPython)
• automatically download and load models from ModelDB <http://senselab.med.yale.edu/modeldb/>_

More info are available on the homepage: http://neuronvisio.org

Offline Documentation

To create offline documentation similar to the one online you will need sphinx http://sphinx.pocoo.org/ installed.

Move in the doc directory::

cd docs

and then launch::

make html

In the _build/html directory you will have the online doc.

How To release

1. Update Changelog
2. Change version at neuronvisio/__init__.py
3. Change to same version in conda.recipe/meta.yaml
4. Commit everything
5. Tag repo python setup.py tag

6. Upload to pipy and anaconda.org

   • PiPy:

     python setup.py make_release

   • Anaconda.org: Got to anaconda.org and click on the website so the last build will be uploaded to the channel.