mbaughn rna-star issues

mbaughn / rna-star

Automatically exported from code.google.com/p/rna-star

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Extremely high percentage of reads too short to map...

#28 GoogleCodeExporter opened 8 years ago
1
failto install in CYGWIN

#27 GoogleCodeExporter opened 8 years ago
0
Problem generating Genome files: out of memory?

#26 GoogleCodeExporter opened 8 years ago
0
STAR only takes the first paired fastq files when there are multiple paired fastq file input

#25 GoogleCodeExporter opened 8 years ago
4
Number of mismatches report in the SAM file is not correct

#24 GoogleCodeExporter opened 8 years ago
2
Can't install star on westgrid

#23 GoogleCodeExporter opened 8 years ago
1
STAR exiting with short read sequence error

#22 GoogleCodeExporter opened 8 years ago
1
bug with ISIZE numbers in .sam ?

#21 GoogleCodeExporter opened 8 years ago
4
human STAR genome not available

#20 GoogleCodeExporter opened 8 years ago
0
I just cannot download STAR genomes.

#19 GoogleCodeExporter opened 8 years ago
0
Error while compiling with make on cygwin 2.831

#18 GoogleCodeExporter opened 8 years ago
1
STAR not scaling to 60 cores... or even 10.

#17 GoogleCodeExporter opened 8 years ago
3
Mac OSX compile problem

#16 GoogleCodeExporter opened 8 years ago
1
multiple-mappers ranking

#15 GoogleCodeExporter opened 8 years ago
1
SA not output with runThreadN >1

#14 GoogleCodeExporter opened 8 years ago
1
Unmapped fastq empty if using --runThreadN

#13 GoogleCodeExporter opened 8 years ago
2
No version information given

#12 GoogleCodeExporter opened 8 years ago
1
STAR freezes

#11 GoogleCodeExporter opened 8 years ago
1
Segmentation fault

#10 GoogleCodeExporter opened 8 years ago
1
Genome.cpp:157:21: error: 'sleep' was not declared in this scope

#9 GoogleCodeExporter opened 8 years ago
4
genomeGenerate with sjdb file mus muscular

#8 GoogleCodeExporter opened 8 years ago
1
second mapping pass

#7 GoogleCodeExporter opened 8 years ago
1
STAR does not have any command line help

#6 GoogleCodeExporter opened 8 years ago
1
core dump on mapping

#5 GoogleCodeExporter opened 8 years ago
2
incompatibility with Cufflinks

#4 GoogleCodeExporter opened 8 years ago
1
Log.final.output

#3 GoogleCodeExporter opened 8 years ago
2
big reference fasta will crash STAR

#2 GoogleCodeExporter opened 8 years ago
4
genome doesn't always load into memory

#1 GoogleCodeExporter closed 8 years ago
2