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medbioinf / pia

:books: :microscope: PIA - Protein Inference Algorithms
https://github.com/medbioinf/pia
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staging 1.4.0 #169

Closed julianu closed 2 years ago

julianu commented 2 years ago
codecov-commenter commented 2 years ago

Codecov Report

Merging #169 (3f8bdb3) into master (d72a729) will increase coverage by 6.37%. The diff coverage is 45.95%.

Impacted file tree graph

@@             Coverage Diff              @@
##             master     #169      +/-   ##
============================================
+ Coverage     55.35%   61.72%   +6.37%     
- Complexity     2351     2484     +133     
============================================
  Files           161      141      -20     
  Lines         16633    15497    -1136     
  Branches       2778     2651     -127     
============================================
+ Hits           9207     9566     +359     
+ Misses         6417     4866    -1551     
- Partials       1009     1065      +56
Flag Coverage Δ
unittests 61.72% <45.95%> (+6.37%) :arrow_up:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
...ermediate/compiler/parser/MzIdentMLFileParser.java 66.97% <ø> (-0.08%) :arrow_down:
.../mpc/pia/modeller/psm/PSMReportItemComparator.java 56.57% <0.00%> (ø)
src/main/java/de/mpc/pia/tools/PIATools.java 4.44% <ø> (+0.27%) :arrow_up:
...java/de/mpc/pia/tools/matomo/PIAMatomoTracker.java 0.00% <0.00%> (ø)
src/main/java/de/mpc/pia/PIACli.java 15.38% <15.38%> (ø)
...mediate/xmlhandler/PIAIntermediateJAXBHandler.java 85.49% <20.00%> (+1.52%) :arrow_up:
...er/protein/inference/AbstractProteinInference.java 9.89% <42.10%> (+3.33%) :arrow_up:
src/main/java/de/mpc/pia/JsonAnalysis.java 49.49% <49.49%> (ø)
src/main/java/de/mpc/pia/modeller/PSMModeller.java 49.87% <50.00%> (+2.50%) :arrow_up:
src/main/java/de/mpc/pia/modeller/PIAModeller.java 59.01% <52.83%> (+37.70%) :arrow_up:
... and 26 more

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