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medbioinf / pia

:books: :microscope: PIA - Protein Inference Algorithms
https://github.com/medbioinf/pia
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resolving a problem with the FDR Score and no decoys or only same score #94

Closed julianu closed 7 years ago

codecov-io commented 7 years ago

Codecov Report

Merging #94 into master will increase coverage by 0.29%. The diff coverage is 87.87%.

Impacted file tree graph

@@             Coverage Diff              @@
##             master      #94      +/-   ##
============================================
+ Coverage     45.46%   45.76%   +0.29%     
- Complexity     2025     2048      +23     
============================================
  Files           171      171              
  Lines         17019    17054      +35     
  Branches       2827     2832       +5     
============================================
+ Hits           7737     7804      +67     
+ Misses         8491     8458      -33     
- Partials        791      792       +1
Impacted Files Coverage Δ Complexity Δ
src/main/java/de/mpc/pia/tools/PIAConstants.java 68.42% <100%> (+1.75%) 1 <0> (ø) :arrow_down:
.../pia/intermediate/compiler/parser/MzTabParser.java 75.46% <20%> (+0.23%) 57 <1> (+1) :arrow_up:
.../main/java/de/mpc/pia/modeller/score/FDRScore.java 91.39% <91.39%> (+0.01%) 22 <22> (+9) :arrow_up:
...ava/de/mpc/pia/modeller/protein/ReportProtein.java 73.51% <0%> (-1.09%) 48% <0%> (-1%)
...ava/de/mpc/pia/modeller/peptide/ReportPeptide.java 62.35% <0%> (+1.17%) 71% <0%> (+1%) :arrow_up:
...c/main/java/de/mpc/pia/tools/pride/PRIDETools.java 49.25% <0%> (+1.49%) 12% <0%> (+1%) :arrow_up:
src/main/java/de/mpc/pia/modeller/PSMModeller.java 41.36% <0%> (+2.84%) 105% <0%> (+10%) :arrow_up:
...pia/modeller/score/comparator/ScoreComparator.java 63.33% <0%> (+3.33%) 7% <0%> (+1%) :arrow_up:
.../mpc/pia/modeller/psm/PSMReportItemComparator.java 53.14% <0%> (+3.42%) 6% <0%> (+1%) :arrow_up:

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