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BiG-MAP
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Interpretation of "Rnf_complex.Glycine_cleavage.succinate2propionate" MGC
#28
flashton2003
opened
1 month ago
0
ERROR: could not open "mash_sketch.msh" for reading.
#27
mmpust
closed
5 months ago
2
BiG-MAP.map.py type error
#26
Lachlan1991
opened
5 months ago
0
Possible to make a release for bioconda recipe?
#25
SantaMcCloud
closed
6 months ago
1
Using BiG-MAP.map.py on metatranscriptome data
#24
zbartolek
opened
1 year ago
0
Hi BiG-MAP team,
#23
hildaha
opened
1 year ago
1
Run BiG-MAP.map.py to see if the TPM results can be generated directly from this step
#22
zhaohanshuang
opened
1 year ago
0
Running python3 BiG-MAP.family.py reports an error BiopythonParserWarning: Attempting to parse malformed locus line:
#21
zhaohanshuang
opened
1 year ago
0
Make output directory if it doesn't already exist
#20
flashton2003
opened
1 year ago
0
Add one in, have to re-run BiG-MAP.map.py?
#19
flashton2003
closed
1 year ago
3
Interpreting big-map outputs
#18
flashton2003
opened
1 year ago
2
Problem with reading results into pd.dataframe during BiG-MAP.map
#17
flashton2003
opened
1 year ago
0
fastq naming pattern hard coded?
#16
flashton2003
opened
1 year ago
4
Allow usage of existing BiG-SCAPE results directory in BiG-MAP.family.py
#15
raufs
closed
1 year ago
0
BiG-MAP.map.py Biom error
#14
AKBode
opened
2 years ago
5
stringent protein similarity results in less clusters
#13
ZhangDengwei
closed
2 years ago
1
ERROR: could not open "01.identity_0.8/mash_sketch.msh" for reading.
#12
ZhangDengwei
closed
2 years ago
1
normalization to control group for log2 fold change
#11
choon-sim
closed
2 years ago
1
2 errors with using BiG-MAP snakemake
#10
choon-sim
closed
2 years ago
0
metagenome_contigs
#9
wisnu-adi
closed
2 years ago
1
BiG-MAP.analyse- ERROR reading BIOM file
#8
ShailNair
closed
2 years ago
7
Error in BiG-MAP.family.py with --metatranscriptomes option
#7
sklucas
closed
2 years ago
10
SameFileError while running BiG-MAP.family.py
#6
ShailNair
closed
3 years ago
2
error while running BiG-MAP.family.py:ValueError: substring not found
#5
ShailNair
closed
3 years ago
3
make_sketch() missing required arguments: 'kmer' and 'sketch'
#4
snayfach
opened
3 years ago
2
Readme: unclear steps for BiG-MAP.family.py
#3
edissepo
closed
3 years ago
1
BiG-MAP.download.py can't download test-set: ftp site is decommissioned
#2
edissepo
opened
3 years ago
1
environment dependencies (yaml-files) are not downloadable
#1
edissepo
closed
3 years ago
1