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mehta-lab / VisCy

computer vision models for single-cell phenotyping
https://pypi.org/project/viscy/
BSD 3-Clause "New" or "Revised" License
29 stars 3 forks source link

Log embeddings in TensorBoard #155

Open ziw-liu opened 1 month ago

ziw-liu commented 1 month ago

Use the embedding projector to log example images with their $h$ and $z$ embeddings in contrastive model training.

mattersoflight commented 4 weeks ago

It will be nice if this works out! We can also use the embedding viewer widget in napari-iohub to visualize the training examples and corresponding embeddings.