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metabaRfactory
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metabaR
metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.
http://metabaRfactory.github.io/metabaR
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Use of deprecated/undocumented igraph functions
#54
szhorvat
opened
4 months ago
0
EMBL import——zlib.error: Error -3 while decompressing data:invalid distance code
#53
asPinus2050
opened
1 year ago
1
update replicate names
#52
lionncle
opened
1 year ago
0
Little Typo in Let's MetabaR! tutorial
#51
LafontRapnouilTristan
closed
1 year ago
1
check_pcr_repl won't work if your samples names start with digits
#50
LafontRapnouilTristan
closed
1 year ago
5
Fix Carla bug in vignette
#49
lionncle
closed
1 year ago
0
Transform plate_col in character to check plate_col values when conca…
#48
AnneSoBen
closed
1 year ago
1
aggregate_pcrs transforms plate_col in factor on Windows 10 - R 3.6.1
#47
AnneSoBen
closed
1 year ago
0
changes to update website with GHA
#46
AnneSoBen
closed
2 years ago
0
fix bug in silva_annotator due to false paths in tax_slv_ssu_138.1.txt
#45
AnneSoBen
closed
2 years ago
0
Website is not synchronized with repository
#44
AnneSoBen
closed
2 years ago
1
Correct silva_annotator for SILVA 138.1
#43
AnneSoBen
closed
2 years ago
0
metabarlist_to_phyloseq function
#42
AnneSoBen
opened
2 years ago
1
Qiime2 to metabaR
#41
martinjfsupagro
opened
2 years ago
2
Customising the text on ggtaxplot
#40
frankie-simo
opened
2 years ago
1
Metabarlist
#39
IreneGregori
closed
2 years ago
5
add option drop=F to dataframe when the sample table is generate with…
#38
lionncle
closed
2 years ago
0
fix bug on check step of devtools and travis build
#37
lionncle
closed
2 years ago
0
fix bug when the method all is use and no contaminants are found, the…
#36
lionncle
closed
2 years ago
0
contaslayer Error: replacement has length zero
#35
rturba
closed
2 years ago
1
read_ngsfilter
#34
rongiergaetan
closed
3 years ago
3
Reduce vignette running time
#33
AnneSoBen
closed
3 years ago
0
other types of negative controls?
#32
metabaRfactory
opened
3 years ago
1
Fix silva annotator
#31
AnneSoBen
closed
3 years ago
0
Documentation: replaced occurrences of the term 'dysfunctional PCR' with 'failed PCR'
#30
celine-mercier
closed
3 years ago
1
Connection with DAMe/Begum?
#29
lzinger
opened
3 years ago
0
hot fix typo in vignette
#28
lionncle
closed
3 years ago
0
Facilitate package installation
#27
AnneSoBen
closed
3 years ago
0
hot fix bug travis dependence install (harfbuzz fribidi)
#26
lionncle
closed
3 years ago
0
hot fix bug travis
#25
lionncle
closed
3 years ago
0
fix bug with typo in the comparison of inter and intra distance density
#24
lionncle
closed
3 years ago
0
data import takes a long time
#23
rturba
closed
2 years ago
3
A typo in function definition `pcr_threshold_estimate`
#22
wangyi91
closed
3 years ago
0
Compressed png images
#21
celine-mercier
closed
3 years ago
0
Cran release
#20
celine-mercier
closed
3 years ago
0
import phyloseq object
#19
fconstancias
opened
4 years ago
0
function to import phyloseq object
#18
fconstancias
closed
4 years ago
0
Usepkgdown
#17
metabaRfactory
closed
4 years ago
0
Extra 'simplify' parameter needed in subset_metabarlist
#16
grossebusedu38
opened
4 years ago
0
licence
#15
lionncle
closed
4 years ago
1
corrected second typing error in pcrslayer help
#14
AnneSoBen
closed
4 years ago
0
Issue12
#13
AnneSoBen
closed
4 years ago
0
error message of taxoparser when using ggtaxplot
#12
AnneSoBen
closed
4 years ago
0
Julian vignette
#11
metabaRfactory
closed
4 years ago
0
Zinger
#10
metabaRfactory
closed
4 years ago
0
Julian vignette
#9
metabaRfactory
closed
4 years ago
0
modified code and documentation of biomfiles_to_metabarlist
#8
AnneSoBen
closed
4 years ago
0
Bug fix pcr outlayer
#7
lionncle
closed
4 years ago
0
Biomfiles to metabarlist
#6
AnneSoBen
closed
4 years ago
0
Zinger
#5
metabaRfactory
closed
4 years ago
0
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