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metagenopolis
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meteor
Meteor is a plateform for quantitative metagenomics profiling of complex ecosystems. Meteor relies on genes catalogue to perform specie level taxonomic assignments and functional analysis.
GNU General Public License v3.0
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Mapped read count and overall mapping rate
#57
fthirion89
opened
1 week ago
0
Sample name with dot
#56
fthirion89
opened
1 week ago
0
misformatted KEGG annotation file for hs_2_9_skin
#55
fplazaonate
closed
1 month ago
1
Meteor should create symlinks with relative, not absolute paths
#54
fplazaonate
closed
4 days ago
2
Add CITATION file
#53
fplazaonate
closed
3 days ago
0
Add CITATION file
#52
fplazaonate
closed
2 months ago
0
Add CITATION file
#51
fplazaonate
closed
2 months ago
0
Fix tree path list
#50
fthirion89
closed
4 months ago
1
Use tigrfam and eggnog annotation for gbm computations
#49
fthirion89
closed
4 months ago
1
Add functional output
#48
fthirion89
closed
4 months ago
1
Remove .git folder from references
#47
fplazaonate
closed
5 months ago
1
Automatic tune counting parameters for normal/fast mode
#46
fplazaonate
closed
4 months ago
1
Remove aghozlane/meteor from conda
#45
fplazaonate
closed
6 months ago
1
Dev fpo
#44
fplazaonate
closed
6 months ago
1
Improve version checking of third-party software
#43
fplazaonate
closed
6 months ago
1
Keep mgp_info in json
#42
aghozlane
opened
7 months ago
0
Fix mypy and pylint warnings
#41
fplazaonate
closed
7 months ago
0
cosmetic changes and better check of parameters
#40
fplazaonate
closed
7 months ago
0
Improve usage and store default values in classes
#39
fplazaonate
closed
7 months ago
0
Improve usage and store default values in classes
#38
fplazaonate
closed
7 months ago
0
Improve usage and store default values in classes
#37
fplazaonate
closed
7 months ago
1
Improve usage and meteor downloader
#36
fplazaonate
closed
7 months ago
1
Remove temporary directory after the tree is built
#35
fplazaonate
closed
7 months ago
1
Better cleanup after meteor strain
#34
fplazaonate
closed
7 months ago
1
Avoid creation of unnecessary lists
#33
fplazaonate
closed
7 months ago
1
Separate mapping and count
#32
aghozlane
closed
4 months ago
0
Easy workflow
#31
aghozlane
opened
7 months ago
0
Improve help messages
#30
aghozlane
closed
7 months ago
0
Improve help messages
#29
fplazaonate
closed
7 months ago
1
Dev fpo
#28
fplazaonate
closed
7 months ago
1
Dev fpo
#27
fplazaonate
closed
7 months ago
1
Dev fpo
#26
fplazaonate
closed
7 months ago
1
Dev fpo
#25
fplazaonate
closed
7 months ago
1
Dev fpo
#24
fplazaonate
closed
7 months ago
1
Master
#23
fplazaonate
closed
7 months ago
1
Dev fpo
#22
fplazaonate
closed
7 months ago
1
Report meteor version in the json files
#21
aghozlane
closed
7 months ago
0
Remove unused string
#20
fplazaonate
closed
7 months ago
1
Cleanup of counter.py
#19
fplazaonate
closed
7 months ago
1
Remove unnecessary import of itertools.reduce
#18
fplazaonate
closed
7 months ago
1
Create an output in the type of mpa
#17
aghozlane
opened
7 months ago
0
Docker version is not working on mac
#16
aghozlane
closed
7 months ago
0
Add meteor on pypi
#15
aghozlane
closed
7 months ago
1
Ete3 brings too many dependencies
#14
aghozlane
closed
7 months ago
1
Writing Sam file generate a huge bandwidth traffic, we need to use cram
#13
aghozlane
closed
8 months ago
0
Exit should return properly 1 when failed
#12
aghozlane
closed
8 months ago
0
Add meteor in bioconda
#11
aghozlane
closed
6 months ago
1
Obtain the pypi domain for meteor !
#10
aghozlane
closed
7 months ago
0
Generate a biom file in meteor merge
#9
aghozlane
opened
8 months ago
1
Meteor Strain should provide more information in the logging.info
#8
aghozlane
closed
8 months ago
0
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