search

metrumresearchgroup / Torsten

library of C++ functions that support applications of Stan in Pharmacometrics
BSD 3-Clause "New" or "Revised" License
52 stars 11 forks source link

Installation test fails on one occation #5

Closed rajaiyer closed 5 years ago

rajaiyer commented 5 years ago

I was able to install torsten and it all went well. However when testing the installation there one test that fails (line 78 shows the error). Is there some configuration that could be changed to make this error free ?

Thanks in advance. ri

result_model.txt

yizhang-yiz commented 5 years ago

I’ll try to reproduce the issue. Meanwhile could you provide information on the compiler and operation system? Thanks.

-YZ

On Feb 16, 2019 at 9:33 PM, <AreEye (mailto:notifications@github.com)> wrote:

I was able to install torsten and it all went well. However when testing the installation there one test that fails (line 78 shows the error). Is there some configuration that could be changed to make this error free ?

Thanks in advance. ri

result_model.txt (https://github.com/metrumresearchgroup/Torsten/files/2872687/result_model.txt)

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub (https://github.com/metrumresearchgroup/Torsten/issues/5), or mute the thread (https://github.com/notifications/unsubscribe-auth/AfkhsBQ8rGjEebNgdVMUdzv2Xfkf9A4wks5vOOmRgaJpZM4a_YQ3).

rajaiyer commented 5 years ago

I am trying to develop this within a docker container within an Ubuntu 18.04. I start with the latest rocker/verse install clang and basically follow the instructions provided within the Tosten wiki.

Thanks ri

yizhang-yiz commented 5 years ago

Please rerun the patched master and let me know if the error is gone. You don't need to rebuild Torsten since only the tests folder has been updated. The exception you were running into is not caused by Torsten functions but how the tests were defined.

rajaiyer commented 5 years ago

I did re-run it and that error seems is resolved.

However, I came across another warning when "./test-torsten.sh --unit " was executed. On line 221 in the attached result file you see the warning "WARNING: GRADIENT TESTS FOR GENERAL_ODE_BDF FAILS. SEE ISSUE 45". Seems like there is a problem with solution of a differential equation in one of the tests.

Any thoughts about it?

Thanks ri

result_unit.txt

yizhang-yiz commented 5 years ago

It's leftover message from an old issue that will be patched in next release. Please ignore it for now. Thank you.

rajaiyer commented 5 years ago

Thanks fora all the help. ri

yizhang-yiz commented 5 years ago

Sure. Please close the issue if you believe it's resolved. Thank you.