Open JFsanchezherrero opened 4 days ago
Hi @JFsanchezherrero ,
Yes. It does, if you provide the parameter -gff, it will create a file "sample.gff" or similar. In that gff file you will have those annotations.
Please note, I am revising the isomiR functions (among others) and the update (new release) will soon be available.
Thank you, Arun.
Hi there @arunhpatil, Thank you very much!
Please, do not change that feature! ;)
Looking forward to new updates. Best regards
I wonder if miRge3.0 output meets miRtop standard as in miRge2.0.
If not fully compatible, I wonder if at least the variant types are named following miRTOP suggested classification scheme: iso_5p, iso_3p, iso_add, iso_snv, iso_snv_seed, iso_snv_central_offset, iso_snv_central, iso_snv_central_suppl
https://pmc.ncbi.nlm.nih.gov/articles/PMC7566869/
Best regards