mhguo1 TRAPD issues - Githubissues

mhguo1 / TRAPD

Burden testing against public controls

MIT License

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ga100k_in burden_analysis

#20 igibmukeshkumar opened 3 years ago
1
make_snp_file.py, includevep, AND, OR

#19 Elliott77 opened 3 years ago
0
Not so good result for TRAPD

#18 gevin-MB opened 3 years ago
2
count_control file gives same output regardless of arguments or input types

#17 Kaskere opened 3 years ago
0
bug in burden.R

#16 Piccetteeno closed 3 years ago
2
bug in make_snp_file.py

#15 weizhu365 opened 4 years ago
1
Possibility to subset genes prior to the burden test

#14 dalmiaa opened 4 years ago
0
inconsistent results

#13 quentin67100 opened 4 years ago
2
Genes on chrX (i.e. _AR_) have zero hom and het counts in step 2b)

#12 dioncst opened 4 years ago
1
Shell in the README is wrong

#11 CancerGenome opened 4 years ago
1
--pop option with gnomad r.2 data

#10 jenkelly10 opened 4 years ago
4
SNPEFF_GENENAME not available for SnpEff annotated vcf

#9 ScubaChris opened 4 years ago
4
vep_annotation

#8 asura117 opened 5 years ago
1
MAF and AF

#7 sureyana956 opened 5 years ago
1
IndentationError: expected an indented block

#6 asura117 closed 5 years ago
0
QQ plot bug

#5 quentin67100 closed 5 years ago
3
TabError: inconsistent use of tabs and spaces in indentation

#4 ankita86 opened 5 years ago
3
Bug reported

#3 CancerGenome closed 5 years ago
2
line 249 make_snp_file.py

#2 ivomuskens closed 5 years ago
1
Create LICENSE

#1 mhguo1 closed 6 years ago
0