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microbiome
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miaViz
Microbiome Analysis Plotting and Visualization
https://microbiome.github.io/miaViz
Artistic License 2.0
10
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12
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Add logo
#61
TuomasBorman
closed
1 year ago
0
Vignette
#60
antagomir
closed
2 years ago
1
Check fails
#59
TuomasBorman
closed
1 year ago
2
Checks fail, fix it
#58
TuomasBorman
closed
2 years ago
0
Update the pkg in Bioc devel
#57
antagomir
closed
6 months ago
1
Fix layout problem in plotRowTree
#56
TuomasBorman
closed
2 years ago
0
print x-axis label in plotAbundance
#55
kusandeep
closed
2 years ago
2
Take into account multiple trees
#54
TuomasBorman
closed
2 years ago
0
SilvermanAGutData from miaTime
#53
TuomasBorman
closed
2 years ago
0
build fix
#52
TuomasBorman
closed
2 years ago
0
Sync bioc
#51
TuomasBorman
closed
2 years ago
0
Replace abund_values with assay_name
#50
TuomasBorman
closed
2 years ago
0
Replace abund_values with assay_name
#49
TuomasBorman
closed
2 years ago
0
plotAbundanceDensity not working when counts assay is missing
#48
RiboRings
closed
1 year ago
2
Plot by group
#46
antagomir
opened
2 years ago
1
plotAbundance problem
#100
antagomir
closed
1 month ago
3
Plot abundance
#45
YagmurSimsekk
closed
2 years ago
5
plotAbundance error?
#44
antagomir
closed
2 years ago
3
Added bugfix for plotting functions to support sparseMatrix and other…
#43
FelixErnst
closed
2 years ago
0
Revert "Added sparseMatrix support to plotAbundance(Density)"
#42
FelixErnst
closed
2 years ago
0
Paired boxplot (e.g. diversity, taxa abundances..)
#41
antagomir
opened
2 years ago
2
neatsort & neatmap
#40
antagomir
closed
2 years ago
5
Biclustering
#39
antagomir
closed
6 months ago
4
Added sparseMatrix support to plotAbundance(Density)
#38
TuomasBorman
closed
2 years ago
0
sparseMatrix breaks plotAbundance(Density)
#37
nr0cinu
closed
2 years ago
6
Add sample names to Abundance Plot
#36
asierFernandezP
closed
3 years ago
8
Color selection in plotAbundanceDensity()
#35
asierFernandezP
closed
3 years ago
4
plotAbundanceDensity bugfix
#34
TuomasBorman
closed
3 years ago
0
Visualizing merged values
#33
antagomir
closed
3 years ago
1
reverting to 4.0
#32
antagomir
closed
3 years ago
0
added order_descending to plotAbundanceDensity
#31
FelixErnst
closed
3 years ago
5
Some updates
#30
antagomir
closed
3 years ago
0
Custom sorting to plotAbundanceDensity
#29
antagomir
closed
3 years ago
7
PlotAbundance bugfix
#28
TuomasBorman
closed
3 years ago
0
Disabled Windows and macOS from GHA
#27
TuomasBorman
closed
3 years ago
0
Fix GHA config
#26
FelixErnst
closed
3 years ago
4
plotRowTree layout bugfix
#25
TuomasBorman
closed
3 years ago
2
Adding info.
#24
ChouaibB
closed
3 years ago
5
plotRowtree plots additional rectanglular tree when changing layout
#23
SvenKB
closed
3 years ago
2
Draft Vignette.
#22
ChouaibB
closed
3 years ago
0
Explained Variance
#21
ChouaibB
closed
3 years ago
3
Composition barplot
#20
antagomir
closed
3 years ago
11
vignette
#19
antagomir
closed
3 years ago
1
plotAbundance returns NULL with order_sample_by
#18
antagomir
closed
3 years ago
10
Added plotAbundanceDensity
#17
TuomasBorman
closed
3 years ago
8
add plot*Tile function
#16
FelixErnst
closed
3 years ago
1
New function: plot_density ?
#15
antagomir
closed
3 years ago
15
Abundance heatmaps
#14
antagomir
closed
4 months ago
9
New function: plot_spread ?
#13
antagomir
closed
3 years ago
3
Tests and vignette
#12
FelixErnst
closed
3 years ago
0
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