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microbiome
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miaViz
Microbiome Analysis Plotting and Visualization
https://microbiome.github.io/miaViz
Artistic License 2.0
10
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12
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Start using rworkflows, minor fixes
#111
TuomasBorman
closed
7 months ago
0
plotRDA ellipse's confidence level
#110
TuomasBorman
closed
5 months ago
1
Internal prevalence calculation function was updated in mia
#109
TuomasBorman
closed
8 months ago
0
replace addTaxonomyTree with addHierarchyTree
#108
thpralas
closed
8 months ago
1
More options from ggplot for plotAbundanceDensity
#122
artur-sannikov
opened
10 months ago
9
plotAbundanceDensity colors
#107
antagomir
opened
10 months ago
2
Fix vignette
#106
TuomasBorman
closed
11 months ago
0
replace deprecations with new funcs
#105
ake123
closed
6 months ago
2
Boxplots significance
#104
antagomir
closed
1 month ago
8
Contributing file
#103
TuomasBorman
closed
1 year ago
0
Fix plotRDA
#102
TuomasBorman
closed
1 year ago
0
plotRDA fix
#101
TuomasBorman
closed
1 year ago
0
Fix vignette
#99
TuomasBorman
closed
1 year ago
0
Remove miaTime
#98
TuomasBorman
closed
1 year ago
0
Disable miaTime chunks in vignette
#97
TuomasBorman
closed
1 year ago
0
Strange example
#96
antagomir
closed
4 months ago
4
plotRDA fixes and docs
#95
RiboRings
closed
1 year ago
0
sysreqs error
#94
TuomasBorman
closed
1 year ago
0
plotRowTree error
#93
TuomasBorman
opened
1 year ago
0
plotRDA, plot loadings
#92
TuomasBorman
closed
3 months ago
13
deprecate Taxa names -> Features
#91
himmil
closed
10 months ago
9
plotAbundanceDensity options
#90
antagomir
opened
1 year ago
0
RDA influences from microViz
#89
antagomir
opened
1 year ago
0
Default ranks
#88
antagomir
closed
4 months ago
3
plotRDA
#87
TuomasBorman
closed
1 year ago
39
argument names
#86
antagomir
closed
4 months ago
1
Update Bioc devel
#85
antagomir
closed
1 year ago
1
Rename agglomerateByRank/Prevalence
#84
Daenarys8
closed
6 months ago
7
update transformCounts to transformAssay
#83
ake123
closed
1 year ago
1
Fix build
#82
TuomasBorman
closed
1 year ago
1
Fix build
#81
TuomasBorman
closed
1 year ago
0
Updated plotDMN to work with newest DMM version
#80
BananaCancer
closed
1 year ago
13
Exprs values
#79
antagomir
closed
1 year ago
0
Fix vignette error
#78
TuomasBorman
closed
1 year ago
0
Enable tests and examples that were disabled
#77
TuomasBorman
closed
1 year ago
1
Enable examples and tests
#76
TuomasBorman
closed
4 months ago
0
Build fix
#75
TuomasBorman
closed
1 year ago
3
Harmonize Dataset Load command
#74
Daenarys8
closed
1 year ago
3
Build fix
#73
TuomasBorman
closed
1 year ago
1
fix typo error
#72
Vivian-Ginika
closed
1 year ago
8
Build fix
#71
TuomasBorman
closed
1 year ago
1
Fix typos in packages method functions, and vignettes
#70
Daenarys8
closed
1 year ago
1
Fixes
#69
antagomir
closed
1 year ago
0
Assay name
#68
antagomir
closed
1 year ago
2
Assay name
#67
antagomir
closed
1 year ago
0
transformSamples to *Counts
#66
TuomasBorman
closed
1 year ago
0
Ord trajec
#65
ChouaibB
closed
1 year ago
11
Ordination plots with trajectories: add examples
#64
antagomir
closed
1 year ago
3
Fix plotGraph*
#63
TuomasBorman
closed
1 year ago
0
Version bump
#62
TuomasBorman
closed
1 year ago
0
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