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milaboratory
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mixcr
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
https://mixcr.com
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Regression tests changes in the develop
#1477
github-actions[bot]
closed
11 months ago
0
Alignment-aided overlap optimization
#1476
dbolotin
closed
11 months ago
0
Regression tests changes in the alignment-overlap-optimization
#1475
github-actions[bot]
closed
11 months ago
0
feat: --no-feature filter for exportAlignmentsPretty
#1474
dbolotin
closed
12 months ago
0
Regression tests changes in the Cell-grouping-finalizing
#1473
github-actions[bot]
closed
12 months ago
0
Zero min bin width
#1472
dbolotin
closed
12 months ago
0
fix npe
#1471
gnefedev
closed
12 months ago
0
fix trees
#1469
gnefedev
closed
12 months ago
0
Question about UMI information in the output files vdjca and clns
#1468
silvia1234567890
closed
12 months ago
1
update version
#1467
gnefedev
closed
1 year ago
0
Regression tests changes in the add-fraction-columns-on-export
#1466
github-actions[bot]
closed
1 year ago
0
Regression tests changes in the add-fraction-columns-on-export
#1465
github-actions[bot]
closed
1 year ago
0
Added read and Molecule fraction columns to single cell exportClones
#1464
mizraelson
closed
1 year ago
0
Regression tests changes in the Cell-grouping-finalizing
#1463
github-actions[bot]
closed
1 year ago
0
update version
#1462
gnefedev
closed
1 year ago
0
updated milam multiplex ig preset
#1461
mizraelson
closed
1 year ago
0
Regression tests changes in the Milab-RNA-IGH-preset-correction-2
#1460
github-actions[bot]
closed
1 year ago
0
Regression tests changes in the Milab-RNA-IGH-preset-correction
#1459
github-actions[bot]
closed
1 year ago
0
milab pattern correction for human IG RNA
#1458
Alex-Davydov
closed
1 year ago
0
Regression tests changes in the kmer-filter-bin-width
#1457
github-actions[bot]
closed
1 year ago
0
Regression tests changes in the update-version
#1456
github-actions[bot]
closed
1 year ago
0
kmer filter minBinWidth=6
#1455
Alex-Davydov
closed
1 year ago
0
update version
#1454
gnefedev
closed
1 year ago
0
Regression tests changes in the no-feature-eap
#1453
github-actions[bot]
closed
12 months ago
0
Regression tests changes in the Cell-grouping-finalizing
#1452
github-actions[bot]
closed
1 year ago
0
Cell grouping finalizing
#1451
Alex-Davydov
closed
12 months ago
0
picocli.CommandLine$ExecutionException: Error while running command refineTagsAndSort java.lang.IllegalStateException: Check failed.
#1450
malonzm1
closed
12 months ago
3
Regression tests changes in the export-changes
#1449
github-actions[bot]
closed
1 year ago
0
Export changes
#1448
gnefedev
closed
1 year ago
0
QC ALERT
#1446
drosop
closed
1 year ago
1
alpha and beta chain dimers from mixcr
#1442
malonzm1
closed
1 year ago
1
Regression tests changes in the sc-trees
#1441
github-actions[bot]
closed
1 year ago
0
Regression tests changes in the VCDR3Mutations
#1439
github-actions[bot]
closed
1 year ago
0
Error in generating plot for "Gini coefficient"
#1438
KashingTang
closed
1 year ago
2
CDR3 mutations
#1437
gnefedev
closed
1 year ago
0
Differences in the clone info between exportClones and exportAirr
#1435
ShaowenJ
closed
1 year ago
0
Pig TCRa chain ref
#1434
Ahmedalaraby20
closed
1 year ago
1
Fixes
#1433
gnefedev
closed
1 year ago
0
Hotfix for 4.5.0
#1432
dbolotin
closed
1 year ago
0
Regression tests changes in the sc-trees
#1431
github-actions[bot]
closed
1 year ago
0
Error analyzing bam file
#1428
malonzm1
closed
1 year ago
3
Low alignment rate when using fastq generated from bamtofastq
#1427
malonzm1
closed
1 year ago
1
Sc trees
#1423
gnefedev
closed
1 year ago
0
Possible to create a cellranger 'filtered_contig_annotations'-like output from '10x-sc-xcr-vdj' outputs?
#1422
jeremymsimon
closed
1 year ago
0
questions about output files (alignment & clonotype)
#1421
silvia1234567890
closed
1 year ago
7
exportAirr clone_id
#1419
Januaryyiyue
closed
1 year ago
2
No preset with name "kAligner2".
#1417
Angieiscute
closed
1 year ago
1
Fatal error during mixer extend
#1408
malonzm1
closed
1 year ago
2
Fix airr
#1406
gnefedev
closed
1 year ago
0
mixcr align tissue
#1402
jiepan1
closed
1 year ago
8
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