millanek Dsuite issues - Githubissues

millanek / Dsuite

Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species

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compile error on ubuntu 18.04

#52 angusdavison closed 2 years ago
2
__main__.NewickError: Unexisting tree file or Malformed newick tree structure. You may want to check other newick loading flags like 'format' or 'quoted_node_names'.

#51 Jiangjiangzhang6 opened 2 years ago
0
Question about Dquartets

#50 CrawlingSponge opened 2 years ago
0
unlinked SNPs from target enrichment data for Suite

#49 ambed0ya opened 2 years ago
0
the Dsuite_fBranch.h:63:84: error: no matching function for call to ‘regex_replace(std::string&, std::regex&, const char [1])’ string treeNoBranchLengths = std::regex_replace(treeString,branchLengths,"");

#48 Jiangjiangzhang6 opened 2 years ago
2
regex issue

#47 Vicbuz closed 2 years ago
0
mixed ploidy dataset

#46 nelidapg opened 2 years ago
0
DtriosParallel support for new Dtrios options and multiple VCF files.

#45 feilchenfeldt closed 2 years ago
0
Plotting fbranch z-scores

#44 RishiDeKayne opened 2 years ago
1
pool-seq

#43 Vicbuz closed 2 years ago
3
Compile error in Fedora34

#42 tomas-fer opened 3 years ago
4
Specifying the labels in sets file

#41 gubrins opened 3 years ago
0
Dsuite showing error with tree file

#40 BiodeB opened 3 years ago
16
When running Dsuite I met a problem

#39 kuangzhuoran opened 3 years ago
1
Floating Point exception

#38 cha04lq opened 3 years ago
4
some question about Dtrios and Dqartets

#37 liuliuli-666 opened 3 years ago
0
missing data

#36 nicolo-tellini closed 3 years ago
3
BBAA.txt for only 1 trio

#35 Marlappp closed 3 years ago
2
Data filtering

#34 gubrins opened 3 years ago
2
Mixed haploid diploid datasets

#33 tbringloe opened 3 years ago
1
Fbranch all 0 entries using v0.4

#32 jessicarick closed 3 years ago
3
Defining the quartets/trios

#31 XueyunF closed 3 years ago
1
P1 and P2 are inverted across different combination.

#30 nicotel closed 3 years ago
1
Counts don't contain info for split 1/2 of P3

#29 sstwins21 opened 3 years ago
0
ERROR: The tree string could not be parsed correctly!

#28 Chenghong412 closed 3 years ago
4
Merge pull request #4 from millanek/master

#27 feilchenfeldt closed 4 years ago
0
No output file generated when a path included in "-n" option of "Dinvestigate"

#26 silvewheat opened 4 years ago
1
Question about the plot of F-branch

#25 silvewheat closed 4 years ago
2
correct output file info in DtriosParallel

#24 feilchenfeldt closed 4 years ago
0
Update README.md

#23 ethering closed 4 years ago
0
Error when parsing tree with Fbranch

#22 mrml500 closed 4 years ago
17
WARNING: Fewer than five blocks to calculate jackknife!!

#21 LeoYYXX closed 4 years ago
3
DsuiteParallel and some fixes f-branch plotting

#20 feilchenfeldt closed 4 years ago
0
The *__combine.txt file format is different from the tutorials.

#19 xiekunwhy closed 3 years ago
3
Urgent help: Installing problem

#18 foala closed 4 years ago
2
Can Dinvestigate sliding window by length not SNP number

#17 baozg opened 4 years ago
3
Can not make a Dsuite

#16 SergeyNikonov closed 4 years ago
1
Tree file creates an error

#15 MarineBio5 closed 4 years ago
3
How does it treat heterozygous sites?

#14 Hinox47 closed 4 years ago
1
Error parsing tree when using Fbranch

#13 cbrock2 closed 4 years ago
3
different results with v0.3

#12 ijulca closed 4 years ago
2
Updated readme with plotting script description.

#11 feilchenfeldt closed 4 years ago
0
Merge pull request #1 from millanek/master

#10 feilchenfeldt closed 4 years ago
1
Dtools dev

#9 feilchenfeldt closed 4 years ago
1
Update README.md

#8 feilchenfeldt closed 4 years ago
0
How to calculate Z-score using Dtrios' output?

#7 silvewheat closed 4 years ago
1
Dsuite: /lib64/libstdc++.so.6: version `GLIBCXX_3.4.20' not found

#6 Yung-Chien closed 4 years ago
2
Some problems about Dsuit

#5 sy-snake closed 4 years ago
5
Issue with Species map?

#4 dylanHco closed 4 years ago
1
Dsuit install error

#3 congzhouczcz closed 5 years ago
1

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