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mist-medical
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MIST
MIST: A simple, scalable, and end-to-end framework for 3D medical imaging segmentation.
Apache License 2.0
21
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12
forks
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Update VERSION in docker-publish.yml.
#41
aecelaya
closed
15 minutes ago
0
Minor bug fix in docker-publish.yml.
#40
aecelaya
closed
22 minutes ago
0
Update publish to docker workflow.
#39
aecelaya
closed
29 minutes ago
0
Refactor preprocessing to production-quality code.
#38
aecelaya
closed
2 hours ago
0
Crash occurs during analysis if dataset has a patient with invalid label set on most recent version
#37
evanmlim
opened
6 hours ago
1
Add types to inputs of add_folds_to_df.
#36
aecelaya
closed
6 days ago
0
Clean up functions for creating paths CSV files.
#35
aecelaya
closed
6 days ago
0
Minor bug fixes for filtering hidden files and error handling for multiple GPUs and small datasets.
#34
aecelaya
closed
6 days ago
0
macOS .DS_Store Files are not filtered from dataset
#33
Acasteo
closed
5 days ago
1
mist_analyze to mist_inspect or mist_screen
#32
PingjunChen
opened
6 days ago
0
Crash when validation batches can't distribute evenly across all GPUs
#31
Acasteo
closed
2 days ago
1
Minor bug fix in utils
#30
aecelaya
closed
1 week ago
0
Edits for dose prediction (regression): Ensure that segmentation mask still works.
#29
doucejosy
closed
1 day ago
2
Refactor analyze_data to production quality code.
#28
aecelaya
closed
1 week ago
0
mist_train failing on last fold: IndexError: single positional indexer is out-of-bounds
#27
fuentesdt
closed
3 weeks ago
1
Implemented clDice in args.py and loss.py
#26
braykzmi
closed
1 month ago
4
MIST Issue
#25
CMSantos1
closed
1 month ago
9
Documentation update
#24
fuentesdt
opened
2 months ago
0
Added check for overwriting previous runs
#23
evanmlim
closed
2 months ago
5
bound box altered
#22
fuentesdt
closed
4 months ago
2
Nihils project
#21
rachelglenn
closed
4 months ago
0
Error handling for local variable referencing
#20
atwam1
closed
6 months ago
3
Update predict.py
#16
AlexBalsells
closed
8 months ago
0
Update README.md
#15
AlexBalsells
closed
8 months ago
1
ENH: need code development dir
#14
fuentesdt
closed
9 months ago
0
Incorrect args attribute in preprocess.py
#13
AlexBalsells
closed
9 months ago
0
Update README.md
#12
aecelaya
closed
10 months ago
0
BUG: no multi-gpu support
#11
fuentesdt
closed
10 months ago
0
run on cluster
#10
fuentesdt
closed
10 months ago
0
Implemented outputting standard deviation image
#9
evanmlim
closed
11 months ago
2
Rglenn branch
#8
rachelglenn
closed
7 months ago
2
cmd line tools
#7
fuentesdt
closed
1 year ago
0
instabilty on large number of labels N=80
#6
fuentesdt
closed
1 year ago
3
How to improve dice score with Lits
#5
rachelglenn
closed
7 months ago
1
Old training data not removed when changing dataset
#4
rachelglenn
closed
7 months ago
1
Bug with TF n4_bias
#3
rachelglenn
closed
1 year ago
1
Update preprocess.py arg attribute typo
#2
AlexBalsells
closed
1 year ago
0
predict.py the FOV is changing with inference
#1
rachelglenn
closed
1 year ago
1