mite-standard / mite_extras

Validation and conversion functionality for reaction SMARTS collected in the scope of MITE
MIT License
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mite_extras

DOI PyPI version

This package contains functionality to validate entries of the Minimum Information about a Tailoring Enzyme (MITE) repository.

This includes:

When used as CLI, mite_extras can automatically update MITE entries (see below). However, it can also be used as a library (e.g. as done in mite_data).

For more information, see the README of the MITE-Standard organisation page.

Installation

Attention: this program has only been tested with Ubuntu Linux.

With pip from PyPI

With hatch from GitHub

Quick Start: Example

Run from command line:

To validate MITE entries or update them to a new schema version (requires mite_extras to be installed via pip).

Run with hatch:

Validate MITE entries or update them to a new schema version

For devs