morispi CONSENT issues - Githubissues

morispi / CONSENT

Scalable long read self-correction and assembly polishing with multiple sequence alignment

https://doi.org/10.1038/s41598-020-80757-5

GNU Affero General Public License v3.0

55 stars 5 forks source link

issues

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Problem - reformatPAF

#39 desmodus1984 opened 4 months ago
1
35 days and going - is it normal to take this long?

#38 katiecdillon opened 6 months ago
1
Error during correction

#37 desmodus1984 opened 1 year ago
0
aborted on example data

#36 dinovski opened 1 year ago
1
malloc(): corrupted top size

#35 jnalanko opened 2 years ago
0
member questions in bmean.cpp

#34 Beauty9527 opened 2 years ago
1
Error in conda version

#33 SwiftSeal opened 2 years ago
2
CONSENT-correct: line 202: 96410 Segmentation fault

#32 JonEilers closed 2 years ago
6
*** Error in `/..... / CONSENT/bin/CONSENT-correction': free(): invalid pointer: 0x00002aaab0019df0 ***

#31 NiklasDreyer opened 2 years ago
2
CONSENT on clustered cDNA with small Window Size

#30 jkbenotmane closed 3 years ago
0
Illegal Instruction in CONSENT-polish

#29 Maggi-Chen opened 3 years ago
1
CONSENT-correct: line 188

#28 jkbenotmane closed 3 years ago
6
CONSENT-correction core dumped

#27 lirr-lichen opened 3 years ago
3
Inflated size of corrected reads compared to input fasta

#26 AnnabelWhibley opened 3 years ago
7
HiFi performance?

#25 giuliaguidi opened 3 years ago
1
v2.2.2 install error

#24 yipukangda opened 3 years ago
8
CONSENT-correct: line 202: 34177 Illegal instruction

#23 kathrine-mcaulay closed 3 years ago
4
Error in bin/explode

#22 desmodus1984 opened 3 years ago
13
CONSENT/bin/explode: No such file or directory

#21 yi1873 closed 4 years ago
0
Segmentation fault during polishing step

#20 hasindu2008 opened 4 years ago
4
long read files input format problem

#19 87joe opened 4 years ago
1
./install.sh error: undefined reference

#18 JuliaLopezDelgado opened 4 years ago
7
install.sh error: no explode and merge file in bin

#17 khoriba opened 4 years ago
3
If CONSENT can be downloaded from conda (my system gcc is too low)

#16 flystar233 opened 4 years ago
1
CONSENT-polish fails at sort step

#15 nadegeguiglielmoni opened 5 years ago
2
CONSENT-polish error: "std::out_of_range"

#14 FSciammarella closed 4 years ago
10
RAM consumption of CONSENT-correct

#13 cmdoret closed 5 years ago
5
fix calls to fpa for compatibility with fpa 0.5

#12 cmdoret closed 5 years ago
1
fpa

#11 linslsf closed 5 years ago
4
Process takes too long - how to filter PAF

#10 ms-gx closed 5 years ago
3
CONSENT-correct problem

#9 WeipengMO closed 5 years ago
6
paf file-size estimate

#8 MichelMoser opened 5 years ago
2
terminate called after throwing an instance of 'std::out_of_range'

#7 novikk closed 5 years ago
6
problem with CONSENT

#6 lfaino closed 4 years ago
2
Add PAF-index

#5 morispi closed 5 years ago
0
Segmentation fault on long-read correction

#4 novikk closed 5 years ago
11
Phase retained?

#3 colindaven opened 5 years ago
1
compilation

#2 colindaven closed 5 years ago
2
Split MSAs

#1 morispi closed 6 years ago
0